Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2049 ATGACAAACAAAAGAATTTGCATTTATTTTCATGTTAGTTCTTCCGTCTTCACACCACCACCTTCCACTTCCACTCTCTTCTCCATCGATCCCATTTCCATGGCTTCCTCCCTCGGCGACAACTTCAACCTTCTCTCGCCTCAACAGCAAGAGCTGGTGAAGATGCTATTGGATAACGGCCAAGAGCACCTGTTTCGCGATTGGCCTGCTCCCGGCGTTGACGACGACCACAAAAATGCGTTCTTCGACCAGCTGACTCGACTAGATTCGAGTTACCCTGGCGGTCTGGAAGCATACATCACAAATGCTAAACGGCTCTTGGCTGATTCTAAGGCTGGCAGAAACCCTTTCGATGGCTTCACACCTTCCGTTCCAACGGGTGAGACTTTGGCGTTTGGTGATGAGAACTACATCAAATTTGAGGAAGCAGGTGTACTTGAAGCTCGGAAAGCTGCGTTTGTTCTTGTTGCCGGTGGTCTTGGCGAGCGTTTAGGATACAGTGGGATTAAGCTTGCGCTTCCTGCAGAAACCACTACCAGAACATGTTTCGTACAGAATTACATTGAATCTATATTGGCTCTTCAAGAAGCCAGCTCACAAGGTGAATCCCAGACACAGATTCCTCTTGTTATTATGACTTCTGATGATACCCATGGACGTACTTTAGAGCTATTAGAATCAAATTCTTATTTTGGTATGCAACCCACGCAAGTAACACTTTTAAAGCAGGAAAAAGTTGCATGCTTAGAAGATAATGATGCCAGGCTTGCATTGGAACCACAAAACAAGTACAAAATTCAGACAAAACCTCATGGACATGGTGATGTGCATGCGCTTCTTTATTCCAGTGGCATTCTGAAAGTATGGTATGAAGCTGGGTTGAAATGGGTTCTATTTTTTCAAGATACAAATGGGCTTCTCTTCAAGGCAATTCCATCAGCACTGGGCGTCAGTGCTGCCAAACAGTACCATGTTAACTCTCTTGCAGTACCTCGAAAAGCAAAAGAAGCTATTGGTGGAATTACCAGACTCACTCACTCTGATGGGAGGTCTATGGTGATAAATGTGGAATACAATCAGCTAGATCCTCTTCTTAGAGCAAGTGGATACCCTGACGGCGACGTAAATTGTGAGACTGGCTACTCCCCATTTCCAGGAAATATTAACCAATTGATTTTAGAACTTGGTCATTACATTGAAGAGCTCTCAAAAACAGGAGGTGCCATTCAGGAGTTTGTTAACCCAAAATATAAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGACTTGAATGTATGATGCAAGACTATCCAAAAACATTGCCCCCATCTGCCAGGGTTGGATTCACGGTGATGGAAACGTGGCTTGCTTATGCACCTGTGAAGAATAATGCCGAGGATGCTGCCAAGGTGCCGAAAGGAAATCCATACCATAGTGCAACTTCTGGAGAAATGGCCATCTATCGTGCAAATAGCATTATTCTCAGAAAGGCTGGTGTCCAAGTAGCAGATCCAGTAGTGCAGGTCTTCAATGGGCAAGAGGTTGAAGTTTGGCCTCGTATCACATGGAAGCCAAAATGGGGTCTGACTTTTAATCGAATCAAGAGCAAAGTCAGTGGAAATTGCTCCATTTCCCTAAGGTCAACTCTGGCCATTAAGGGTCCAAATATTTTTATTGAAAATCTGTCCGTAGATGGGGCTCTAATCATTGATGCTGTGGATGATGCAGAGGTAAATGTGAGTGGTTCAGTTCAAAACAATGGTTGGGTCCTTGAGACCGTTGACTACAAAGATGCCTCGGAGCCTGAGGTATTGAGAATCCGGGGTTTTAAATTTAACAAAATTGAGCAGCTGGAAACGAAATACTCTGAGCCTGGCAAATTTCACTTGAAGGCTTGA 1902 0.4427 MTNKRICIYFHVSSSVFTPPPSTSTLFSIDPISMASSLGDNFNLLSPQQQELVKMLLDNGQEHLFRDWPAPGVDDDHKNAFFDQLTRLDSSYPGGLEAYITNAKRLLADSKAGRNPFDGFTPSVPTGETLAFGDENYIKFEEAGVLEARKAAFVLVAGGLGERLGYSGIKLALPAETTTRTCFVQNYIESILALQEASSQGESQTQIPLVIMTSDDTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLEDNDARLALEPQNKYKIQTKPHGHGDVHALLYSSGILKVWYEAGLKWVLFFQDTNGLLFKAIPSALGVSAAKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSMVINVEYNQLDPLLRASGYPDGDVNCETGYSPFPGNINQLILELGHYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANSIILRKAGVQVADPVVQVFNGQEVEVWPRITWKPKWGLTFNRIKSKVSGNCSISLRSTLAIKGPNIFIENLSVDGALIIDAVDDAEVNVSGSVQNNGWVLETVDYKDASEPEVLRIRGFKFNKIEQLETKYSEPGKFHLKA* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2049 633 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 37 610 IPR039741 -
Gso4g2049 633 CDD UGGPase 151 465 - -
Gso4g2049 633 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 46 500 IPR029044 -
Gso4g2049 633 Pfam UTP--glucose-1-phosphate uridylyltransferase 148 297 IPR002618 GO:0070569
Gso4g2049 633 PANTHER UDP-SUGAR PYROPHOSPHORYLASE 37 610 - -
Gso4g2049 633 SUPERFAMILY Nucleotide-diphospho-sugar transferases 50 573 IPR029044 -
Gso4g2049 633 Gene3D - 501 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2049 Gso-Chr4 50900450 50908385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2049 K12447 - gmx:778158 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2049 4 50900450 50908385 Gso4g2049 4 50900450 50908385 ECH
Gso4g2049 4 50900450 50908385 Gso6g1002 6 9683148 9691510 GST