Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2030 ATGAATAGCCAGGCTTATAAAAGCAGCACCCAGCAAAGAGAAGAAAACCACCAAAGCCACTGCATTACCAATTTGAAACCAAAACACCAAAACCAAACCATGGAAATTGAAGTTCCTGTTGTGATTGTGGGTGCTGGCCCTGCTGGCTTAGCAACCGCTGCATGCCTTAACAAATATTCCATCCCCAACGTTGTTTTAGAAAGACATGATTGTCATGCATCTCTTTGGAGGAAAAGGACTTATGACCGCTTGAAACTTCACTTAGGCAAAGATTTTTGCAATCTCCCTCATATGCCCTTTCCTCTAGATTTTCCTACCTTTGTCCCTAGGGTTGACTTTTTACGTTACTTGGACAACTATGTCACCCGTTTTAAGATTTCCATCCGGTATACCCGGAATGTGGAATCTGCTTCTGTGGATGAAGAAAACAATGGGAAATGGAGGGTTGTTGTGAAGGACACAACAACAAATGCTGATGAGGTTTATGTGGCAGACTATCTGGTGGTTGCAACTGGGGAGAATGATGAAGGGTATGTGCCCCAGATTGAAGGGCTTGAAGGGTTTGAAGGGGAACACATGCATTGCAGCCAGTACCTGAATGGAAGACACCTGTATGGAAAAAATGTCCTTGTTGTTGGCAGTGGCAACTCTGGCATGGAGATAGCTTATGATCTCTCAACTTGGGGTGCAAATACCTCTATTGTTATTAGGGGCCCTGTTCATTATTTTACCAAAGAAATGGTTTTCGTGGGAATGTCCTTGCTGAAATACTTCAAAATGGAGAAGGTGGACAAGCTTATGTTGCTCATGAGCAAACTGAAGTATGGAGACATGTCCGAGTATGGCTTGGTCAGGCCAAAGGATGGACCCTTCTTTCTGAAGATAAAGGGTGGAACTACCCCTACCATTGATGTGGGTTGCGTTAGTAGGATTAAGAAAGGCGAAGTAAAGGTTTTCCCTGCTATTTCAAGCATCAAAAAGGACAAGATGGTTGAGTTTGAGGATGGACAAAATGGTCAATTTGATGTCATCATCTTTGCTACTGGATACAATAGCACTGTGCTGAAGTGGCTTAAGGATTACAGAGGGCTGTTCAATGAGAATGGAATGCCAAAACCAAGTTTTCCAAATCACTGGAAGGGAAACAACGGTATCTACTGCGCTGGATTTTCAAGAAGGGGATTAGATGGCATTGCTTTTGATGCCCAGCGTATTGCTGATGACATAAAAAAGACTCTGAATGCAAGGAACTTACCCGGTGATGAAGAGGACAATTTTGCTTCCCTCAAACTCTTAGGAAAATAA 1305 0.4307 MNSQAYKSSTQQREENHQSHCITNLKPKHQNQTMEIEVPVVIVGAGPAGLATAACLNKYSIPNVVLERHDCHASLWRKRTYDRLKLHLGKDFCNLPHMPFPLDFPTFVPRVDFLRYLDNYVTRFKISIRYTRNVESASVDEENNGKWRVVVKDTTTNADEVYVADYLVVATGENDEGYVPQIEGLEGFEGEHMHCSQYLNGRHLYGKNVLVVGSGNSGMEIAYDLSTWGANTSIVIRGPVHYFTKEMVFVGMSLLKYFKMEKVDKLMLLMSKLKYGDMSEYGLVRPKDGPFFLKIKGGTTPTIDVGCVSRIKKGEVKVFPAISSIKKDKMVEFEDGQNGQFDVIIFATGYNSTVLKWLKDYRGLFNENGMPKPSFPNHWKGNNGIYCAGFSRRGLDGIAFDAQRIADDIKKTLNARNLPGDEEDNFASLKLLGK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2030 434 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 37 417 - -
Gso4g2030 434 PRINTS Pyridine nucleotide disulphide reductase class-I signature 39 61 - -
Gso4g2030 434 PRINTS Pyridine nucleotide disulphide reductase class-I signature 167 176 - -
Gso4g2030 434 PRINTS Pyridine nucleotide disulphide reductase class-I signature 208 233 - -
Gso4g2030 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Gso4g2030 434 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Gso4g2030 434 Pfam Pyridine nucleotide-disulphide oxidoreductase 41 239 - -
Gso4g2030 434 SUPERFAMILY FAD/NAD(P)-binding domain 40 310 IPR036188 -
Gso4g2030 434 Gene3D - 32 419 IPR036188 -
Gso4g2030 434 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 37 417 - -
Gso4g2030 434 SUPERFAMILY FAD/NAD(P)-binding domain 178 414 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2030 Gso-Chr4 50671770 50674434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2030 K11816 - gmx:100818396 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2030 4 50671770 50674434 Gso4g2030 4 50671770 50674434 ECH