Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2020 ATGGCATCAGCCTTGTCCACGACCAGTGTGCTTTGCTGGAGGAATCCTCAGCACATGCATATTATCTCACCCTCTTCACAGACACTTCAAAATGGAACTCTAAGAACTGTAGCTGCTTCAGCCTCAAAAGATATCAGCATAGAAAGTGACAAGTGTTCCTCTTTGTTGGTGAACAGAAGAACAATTTTGGCTTCTGGGGTTTCCTTGTTGTCTTTCCCGGGTGAGAGTTTGGCTGTGGTGAAACAAGGCCTTCTAGCAGGGAGAATTCCTGGCCTGTCCGAGCCAGATGAACAAGGTTGGAGGACCTATCGCAGGCCGGATGAGAAGTCAGGAGGACATGGTGTTGGATGGAGTCCTATTATTCCATACAGCTTCAGAGTGCCTGAAGAATGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGCACAGAGATAGATTTGAGATTTGCCAGCTCTAAGGAAGGACGTTTGTTTGTCATTGTTGCTCCTGTTCTTAGATTCTCCGATGATCTTGGTGACAATGCTACAATAGAAAAAATTGGACCTCCAGAGAAAGTGATCAATGCATTTGGTCCAGAAATGATTGGGGAAAATGTAGAAGGGAAGGTTCTGAGCGTTAGTGCAGCAGAACATGAAGGAAGAACTTACTACCAGTTTGAGCTAGAGCCTCCCCATATTTTCATTACTGCCACTGCAGCTGGCAACCGCTTATATTTGTTTGGAGTAACAGGCAGCGGTCTTCAGTGGAAGAGACACTACAATGATTTGAAGAAGATAGCTGAATCTTTCCGGGTTGTATAA 804 0.4527 MASALSTTSVLCWRNPQHMHIISPSSQTLQNGTLRTVAASASKDISIESDKCSSLLVNRRTILASGVSLLSFPGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFRVPEEWEEVPVSIADLGGTEIDLRFASSKEGRLFVIVAPVLRFSDDLGDNATIEKIGPPEKVINAFGPEMIGENVEGKVLSVSAAEHEGRTYYQFELEPPHIFITATAAGNRLYLFGVTGSGLQWKRHYNDLKKIAESFRVV* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2020 267 Pfam PsbP 123 266 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gso4g2020 267 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 120 267 - -
Gso4g2020 267 PANTHER - 16 267 - -
Gso4g2020 267 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 16 267 - -
Gso4g2020 267 SUPERFAMILY Mog1p/PsbP-like 115 266 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2020 Gso-Chr4 50542866 50545166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2020 - - gmx:100785447 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2020 4 50542866 50545166 Gso4g2020 4 50542866 50545166 ECH
Gso4g2020 4 50542866 50545166 Gso6g1031 6 10058085 10060274 GST