Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2017 ATGGAGATATGGAATAGTTGGTGGGTTTTGCAAATTATGCAATTTCTGGGTTTTTTTAGTTTTTGGATTTCATTTGCAAAGTTTAGGACTTTATTCTCAAGAGCTTTTGGTTATGGCCACAAGGTTGTGAAGGGTGACTGCAGTACTTGGATCTTTGTTTCCTTCAATGGGTTGGTCACAGTTGGTTCTTTCATATTCTTCCTCTTGGTCCTTTCCTGGGCTTATTTATACGCATTTCCCAGTTCTCAATCACTGATTCAGAGTCATGAGATTCCCATCAACAGTTCTGACTCACTTGTTCAGAGTTATGAGATTCCCAGCAACAGTTCTGACTCACTTGTTCAGAGTTATGATGTGATTCTAAAACCCAATGTTTCAATGGACACATGCAATGTGTTTGAAGGAAGTTGGGTGAGGGATGATAGCTACCCTTTGTATGATGCTTCTCACTGCCCTTTTGTTGAAAGGGGTTTCAATTGCCTTGCTAATGGGAGAAAAGATAGAGATTACACAAAATGGAGGTGGAAACCTAAGAACTGTGAGATTCCAAGGTTTGATGCCCGTGGAATACTTGAACAACTTCGTGGGAAAAGGGTGGTATTCGTTGGCGATTCGTTGAGTAGGACACAATGGGAGTCCATGATATGCTTGCTGATGACAGGAGTTGAGGATAAGAAGAGTATCTATGAAATCAAGGGCAACAAAATCACAAAACAGATAAGGTTTTTAGGTGTGAGGTTTAGTACTTTTGATGTTAGAATCGATTTTTATCGATCGGTGTTCCTGGTGAGGCCTGGTTCTGTGCCTAGACATGCACCCCAAAGAGTGAAGACAACATTGAGATTGGACAAGATTGATGATATTAGCCATGAGTGGATTGATTCTGATGTTCTTATATTCAATTCAGGTCACTGGTGGACACGGACTAAGCTTTTTGACGTGGGCTGGTATTTTCAGGTTGATAACTCACTGAAGCTTGGAATGACAATTAACTCTGGTTTCAACACAGCTTTACTCACCTGGGCATCTTGGGTAGAGAGTACAATTAACACAAACAGGACAAGAGTATTTTTCCGCACCTTCGAATCATCTCATTGGAGTGGACAGAATCACAATTCTTGCAAAGTGACTAAAAGGCCTTGGAAGAGAACTAATCGCAAAGAGAGAAACCCAATTTCAAATATGATCAATAAAGTTGTCAAAAGCATGAGTGCTCCAGTAACAGTTATGCATGTTACACCAATGACTGCATATAGAAGTGATGGACACGTGGGCACTTGGAGTGACCAGCCATCTGTTCCTGATTGTAGCCATTGGTGCTTACCCGGTGTTCCTGATATGTGGAACGAAATTCTCCTCTCGTATTTGCTACCAAAATAA 1380 0.4101 MEIWNSWWVLQIMQFLGFFSFWISFAKFRTLFSRAFGYGHKVVKGDCSTWIFVSFNGLVTVGSFIFFLLVLSWAYLYAFPSSQSLIQSHEIPINSSDSLVQSYEIPSNSSDSLVQSYDVILKPNVSMDTCNVFEGSWVRDDSYPLYDASHCPFVERGFNCLANGRKDRDYTKWRWKPKNCEIPRFDARGILEQLRGKRVVFVGDSLSRTQWESMICLLMTGVEDKKSIYEIKGNKITKQIRFLGVRFSTFDVRIDFYRSVFLVRPGSVPRHAPQRVKTTLRLDKIDDISHEWIDSDVLIFNSGHWWTRTKLFDVGWYFQVDNSLKLGMTINSGFNTALLTWASWVESTINTNRTRVFFRTFESSHWSGQNHNSCKVTKRPWKRTNRKERNPISNMINKVVKSMSAPVTVMHVTPMTAYRSDGHVGTWSDQPSVPDCSHWCLPGVPDMWNEILLSYLLPK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2017 459 Pfam PMR5 N terminal Domain 129 181 IPR025846 -
Gso4g2017 459 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 47 457 IPR029962 GO:0016413
Gso4g2017 459 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 182 454 IPR026057 GO:0016740
Gso4g2017 459 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 47 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2017 Gso-Chr4 50519634 50522999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2017 - - gmx:100784384 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2017 4 50519634 50522999 Gso4g2017 4 50519634 50522999 ECH
Gso4g2017 4 50519634 50522999 Gso6g1034 6 10079101 10083007 GST