Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2010 ATGAAGAGGAGCAGAGATATGGAGAAGAGATCAGAGATAAATTCTGCAATTGAAGAGTTGTCTATGCTGGTTATAGTCAAACCTGAAGGAAATCATAAGATTGCACACATCCCCACAAAGCCTTTCCTATCTCTATGTTACTTGGTTCTACAAGTTATTGATAAGATAGGACCAACCATGGCTGTTTTGAGACAAGACGTTTCCCAGAATATTAAGAGGTTGGAAGTGATGCATGAATTGAATCCCTCGATGAATTCAAATTTGGTTGAAATATTGAAATCAGAAGCTACCAAAGGCAAAGCAAGGAAGAGGTCTAGTTGTAGTAAAGCCTTTCTTTGGCTCACTAGGTCCCTGGATTTCTCCTCAGCATTGTTACAATCACTAGAAAACGATCCTAAAAAGGATTTGGAGCAAATAATTCAAGAATGTTATGATGCAACCTTGTCACCATGGCATGGATGGATTTCGTCAGCTGCTTTCAGAGTGGCTAAAAAACTAGTGCCAGATAGTAAAACTTTGATGGATCTCCTCAAGGAAAAAGATGAAAACTGTGAAACCCTAAAGGAGAAAATGCAGATCTTGGTTTCCTTGCTTGTGCCATTTCTTGAGGATGTTCATTGTATTCTTAAAATTTATAACTTGGACAGGATTAAGTCAACCTGA 663 0.3831 MKRSRDMEKRSEINSAIEELSMLVIVKPEGNHKIAHIPTKPFLSLCYLVLQVIDKIGPTMAVLRQDVSQNIKRLEVMHELNPSMNSNLVEILKSEATKGKARKRSSCSKAFLWLTRSLDFSSALLQSLENDPKKDLEQIIQECYDATLSPWHGWISSAAFRVAKKLVPDSKTLMDLLKEKDENCETLKEKMQILVSLLVPFLEDVHCILKIYNLDRIKST* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2010 220 Coils Coil 170 197 - -
Gso4g2010 220 Gene3D Glycolipid transfer protein 1 216 IPR036497 -
Gso4g2010 220 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 217 - -
Gso4g2010 220 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Gso4g2010 220 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 217 - -
Gso4g2010 220 SUPERFAMILY Glycolipid transfer protein, GLTP 36 216 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2010 Gso-Chr4 50452291 50454389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2010 - - gmx:100527808 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2010 4 50452291 50454389 Gso4g2010 4 50452291 50454389 ECH
Gso4g2010 4 50452291 50454389 Gso6g1046 6 10158691 10160671 GST