Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2004 ATGCAGATCAGGGGATCGAGTCACAGACTCTCCAGTATGGGCAATAATCGATCCCGCATTCCCGCGCTCCTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTCGCTGGAAGGCTGTGGCAGGACGCAGAGAATCGCGTTTATCTCATCAAAGAGCTCGATAGGATCACTGGCCAGGGACAATCTGCTATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTCGATGCAATTGAGACGGAACTTGCTGGAGCTAGACAAGAGGGTTTTGTTTCAAAACCCTTGATAAAGACTAATGGAACTTACTCAATGAGAAGGCCGTTGGTCGTGATAGGTATACTGACAAAGTTTGGTCGCCAGAAGAATAGAGATGCAATTCGAAAGGCATGGATGGGGAGTGGTGCATCTTTGAAAAAAATTGAAGAAGGAAAGGGCATCATTGTGCAATTTGTTATTGGTAGAAGTGAAAATCGTGGAGACAATCAAGATAAAGACATTGATCGTGAGAATAGGCTGACTAATGACTTCATAATTCTCGATAATCATGTGGAAACAAATGATGCATTCCCAAAGAAGGCCAAATTGTTCTTTGCTCATGCTGCAGACAAATGGGATGCTGAGTTTTATGCGAAAGTCAATGATGATGTCTATGTAAATATTGATGCCTTGGGAGCTACACTAGCTACTCATTTGGACAAACCTCGTGTTTACATGGGATGCATGAAATCAGGGGAAGTTTTCTCTGAGCTGAACCATAAATGGTATGAACCAGAGTGGTGGAAATTTGGTGACAAAAAATCATACTTTCGTCATGCATCAGGAGAGATGTATGTTATATCACAAGCTTTGGCTAAATTTATATCAATAAACAGATCTATTCTCCGTACCTATGCCCACGATGATGTGAGTGCTGGATCCTGGTTTATCGGGCTTGATGTGAAGCATGTTGATGAGGCCAAGTTTTGTTGCTCATCTTGGTCGACAGGAGCAATCTGTGCTGGTGTTTGA 1032 0.4293 MQIRGSSHRLSSMGNNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDAIETELAGARQEGFVSKPLIKTNGTYSMRRPLVVIGILTKFGRQKNRDAIRKAWMGSGASLKKIEEGKGIIVQFVIGRSENRGDNQDKDIDRENRLTNDFIILDNHVETNDAFPKKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRVYMGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2004 343 Coils Coil 76 96 - -
Gso4g2004 343 Gene3D - 107 335 - -
Gso4g2004 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso4g2004 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Gso4g2004 343 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2004 Gso-Chr4 50393496 50398217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g2004 23 343 Glycosyltransferase AT5G53340 71.963 6.15e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2004 K20854 - gmx:100779561 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2004 4 50393496 50398217 Gso6g1053 6 10211545 10217114 GST