Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g2003 ATGGACTACGATTTCAGAAGCAGGTCGGGCCCACAACCTCCGATTTACCGTCCGCCACCGCCACCGTCACCGTCACCGATGTACCGTCCATCACCGTATCAGCAGAATCCTACTCCTTCTTCAGGATTTGGCGTTAGGGTTGGTATAAAGCCAGAATATAGGATCACACCGCCGCCTCATTTATCATCCCTTGCGGGAGATAATCCACGGAGCAACTTCCAATTTGATTTTGGATTGGAGAGAAAAATTTTAGCCGAAGCAGAGAAGGATAACCCAAATTGGAGCAAATTTGGATCAGAAAATGTTCCGACTAAAGTTTCTGATTCATCAACAGCAAAGGTTACTGCTTTGGATCCCATTGTGAGCAAATTTATGGCCATGGGGCTTAGCCAAGAGGCTGTTCCCATTGCCGTTGAAAATTATGGTGATAATCCAACCAAAGTTCAGGAATTCGTCAATGGCTACACCCTTTTGCGTGAAATGGGATTTTCATCAAATAGCGTTGCTGACGCCTTGGTTATGAATGACAATCATACGGACAAGGCGCTAGCACATTTCCTTAATGGCTCATCCTGA 576 0.4583 MDYDFRSRSGPQPPIYRPPPPPSPSPMYRPSPYQQNPTPSSGFGVRVGIKPEYRITPPPHLSSLAGDNPRSNFQFDFGLERKILAEAEKDNPNWSKFGSENVPTKVSDSSTAKVTALDPIVSKFMAMGLSQEAVPIAVENYGDNPTKVQEFVNGYTLLREMGFSSNSVADALVMNDNHTDKALAHFLNGSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g2003 191 Gene3D UBAP1 SOUBA domain 105 190 IPR042575 -
Gso4g2003 191 PANTHER LD44032P 33 191 IPR038870 GO:0000813|GO:0043130|GO:0043162
Gso4g2003 191 SUPERFAMILY UBA-like 147 189 IPR009060 GO:0005515
Gso4g2003 191 MobiDBLite consensus disorder prediction 12 33 - -
Gso4g2003 191 PANTHER - 33 191 - -
Gso4g2003 191 MobiDBLite consensus disorder prediction 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g2003 Gso-Chr4 50390138 50392849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g2003 - - gmx:100500107 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2003 4 50390138 50392849 Gso6g1054 6 10217621 10220997 GST