Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1832 ATGCTGCAACAGCTATGCCTATCTAGCATCCTTTTATCAACAAAGCCTGTGCCAAATCTCTCTCTCTCTCTCTCTCTCTCAAGATCTGAAATCACTCTGATGGAGCAGAGAAAGGAGAAAAATGCTCCTTGGTTATCAGTGCCACAGTTTGGGGACTGGGATCAGAAGGGACAAGTGCCGGACTACTCGCTAGATTTCTCTAAAATTCGGGAAACGAGGAAGCAAAACAAGACAAATATTTCAAGGGCAAGTCTTGGTAACGAAGAGGAGCTCACGGCTTCTGCCACTAACAATGCAAACACTGTCCACAGTGATGAGCACCAGCACCCCCACTACAACCAAACCAACTCTCCAACTTCCAGGAGGAGCTTCCTGAGCTACTTCAACTGCTGCGTAAAAGCTTGA 405 0.4691 MLQQLCLSSILLSTKPVPNLSLSLSLSRSEITLMEQRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEELTASATNNANTVHSDEHQHPHYNQTNSPTSRRSFLSYFNCCVKA* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1832 134 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 34 133 - -
Gso4g1832 134 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 34 133 - -
Gso4g1832 134 MobiDBLite consensus disorder prediction 84 119 - -
Gso4g1832 134 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1832 Gso-Chr4 48593219 48596201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1832 - - gmx:100305497 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1832 4 48593219 48596201 Gso6g1238 6 12042079 12045053 GST