Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1813 ATGCAATTAGCACGATGGCGAAACTTGTCATCTCTAAAGACTCACGTTATTGCCTCTGTTACGCATTTCTCCCAGTTTCATTCCACTCCTTGTTCCTGTCAGAAGTGGAACAACAAATTCAACTCCGATGTAAAAAAAGGTCAACAACCATCTAAGAATCACATAAAATTTATTACACGTCAGAAGCGTGCTGACGCAAAGAAAGCTCTCAATAGTCTTCTTTACAATAATGGAGCCTCTAAATTTTCTTTTGAGGAAAAGTATGGATACCAAGGTAGATTTTCCAATAAAGATCAACCAAAGTCTGGTCAACCAAAATCTGGTCAACATTCTGGTGGAAAACCACAAAAGAAAAGTAAACGAAAAATCAGAAGAGAAAGTTTCTCCGAGGACTTTGACGGCCATACTGAGCAAATATTCCAGGCAACATTTGGTAACAAATGGTATACATGGTCCTTCAACGATTGGAGAAGTTCTTCCTCTGAACATTCCACATCTGGGTTTGAATGGAGGGAACATTCAAATAGGACAAACAAGTGGAAAAATGAAAGTGATACTGAGCATGAAGATGATGACTCTTGTTGTGAAGGATCAAGTTCTGATAGAACTGTTCTGGGTCTGCCTCCAACAGGTCCATTAAAGATTGAAGATGTTAAAAATGCTTTCCGGTTATCAGCTTTAAAATGGCATCCTGATAAGCATCAGGGCCCTTCCCAGGCAATGGCTGAAGAAAAATTCAAACTGTGTGTAAATGCATACAAAACATTATGCAATGCTCTCGCCCCATCTTAG 792 0.3927 MQLARWRNLSSLKTHVIASVTHFSQFHSTPCSCQKWNNKFNSDVKKGQQPSKNHIKFITRQKRADAKKALNSLLYNNGASKFSFEEKYGYQGRFSNKDQPKSGQPKSGQHSGGKPQKKSKRKIRRESFSEDFDGHTEQIFQATFGNKWYTWSFNDWRSSSSEHSTSGFEWREHSNRTNKWKNESDTEHEDDDSCCEGSSSDRTVLGLPPTGPLKIEDVKNAFRLSALKWHPDKHQGPSQAMAEEKFKLCVNAYKTLCNALAPS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1813 263 Gene3D DnaJ domain 172 261 IPR036869 -
Gso4g1813 263 SMART dnaj_3 199 261 IPR001623 -
Gso4g1813 263 MobiDBLite consensus disorder prediction 166 197 - -
Gso4g1813 263 Pfam DnaJ domain 204 258 IPR001623 -
Gso4g1813 263 MobiDBLite consensus disorder prediction 95 112 - -
Gso4g1813 263 CDD DnaJ 204 258 IPR001623 -
Gso4g1813 263 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 261 - -
Gso4g1813 263 MobiDBLite consensus disorder prediction 160 210 - -
Gso4g1813 263 MobiDBLite consensus disorder prediction 93 130 - -
Gso4g1813 263 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 261 - -
Gso4g1813 263 SUPERFAMILY Chaperone J-domain 164 258 IPR036869 -
Gso4g1813 263 ProSiteProfiles dnaJ domain profile. 200 261 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1813 Gso-Chr4 48355119 48365036 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1813 - - gmx:100526896 537.339