Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1796 ATGGCTTCTTCTAAGATCATCTTCATATTTCTCCTCTTTCTAGCACACCTTCATCAACATACATTTGTGAAAGGAGATTCCAGTTTGATAAAGAGAACTTGCAAGAACACCAAGTACTACAATCTATGCTTCTCTTCCCTCAAATCTGATCCTAGCAGTCCAAACGCAGATCCTAAGGGCCTAGCTGTGATCATGATTGGGATTGGAATGACCAATGCCACTTCCACTTCTTCCTACTTGTCTTCAAAGTTGCTTAGCCCCTCCAACAACACAACCTTGAAAAGGGTCCTAAAGGAGTGTGCAGATAAGTACTCATATGCTGGTGATGCCCTCCAAGATTCGGTTCAGGATTTGGCTAATGAGGCTTATGACTATGCTTACATGCACATCACTGCCGCCAAAGATTACCCAAATGCTTGCCACAACGCTTTCAAACGGTACCCCGGTTTGGCTTATCCTCGTGATCTTGCTAGTAGAGAAGATGGTTTGAAGCATATATGTGATGTGGCAATGGGGATTATAGATAATCTTGATTGGTAG 540 0.4296 MASSKIIFIFLLFLAHLHQHTFVKGDSSLIKRTCKNTKYYNLCFSSLKSDPSSPNADPKGLAVIMIGIGMTNATSTSSYLSSKLLSPSNNTTLKRVLKECADKYSYAGDALQDSVQDLANEAYDYAYMHITAAKDYPNACHNAFKRYPGLAYPRDLASREDGLKHICDVAMGIIDNLDW* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1796 179 SMART PMEI_2 25 173 IPR006501 GO:0004857
Gso4g1796 179 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 10 177 - -
Gso4g1796 179 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Gso4g1796 179 CDD PMEI_like 34 176 - -
Gso4g1796 179 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Gso4g1796 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 177 IPR035513 -
Gso4g1796 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 177 - -
Gso4g1796 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1796 Gso-Chr4 48170541 48171509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1796 - - gmx:100306461 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1796 4 48170541 48171509 Gso6g1279 6 12492886 12493797 GST