Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1766 ATGGATTCAGCAGAGAAGAGGCTCAATGAGCTTGGTTACAAGCAAGAACTGAGAAGAGAAATGACTTTGTTTAAGACTCTGGCAATATCATTTTCCACAATGACCCTTTTCACTGGAATTACACCTCTCTATGGTTCTAGTCTTCAATATGCAGGCCCTGCAACTCTTGTTTGGGGGTGGATAGTGGTTTCTTTCTTCACTTGGTTTGTTGGGATTGCAATGGCTGAGATATGCTCATCCTTCCCGACGACTGGTTCTCTGTACTTTTGGGCTGCCCATTTAGCTGGTCCAAAATGGGGACCATTTTCTTCATGGTGCTGTGCTTGGCTTGAGACCATAGGGCTTATAGCTGGGATAGGGACTCAGGCATATGCAGGTTCACAAACGTTGCAGAGTATAATCCTACTCTCAACTGGCACAAATAAAGGTGGAGGATACTTCGCTCCAAAATGGCTATTCTTATGTATGTATATTGGCCTCACTGTTATATGGGCAGCACTAAACACATTTGCATTGGAAGTGATTGCTTTGATCGATATAGTTTCAATATGGTGGCAGGTTATTGGTGGAATTGTGATAGTCATAATGTTACCTCTGGTAGCACTGACTACAAAATCTGCTTCATTTGTATTCACACACTTAGAATTGGCCCCTGAATCAACAGGAGTATCAAGCAAACCATATGCAGTCATTCTATCATTTCTTGTCAGCCAGTATTCTCTCTATGGCTATGATGCTGCAGCACATTTAACTGAAGAAACCAAAGGTGCAGACAAGAACGGGCCTATTGCAATACTAGGTAGTATTGGGATCATTACAGTATTTGGATGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGATTTTGGTTACCTTTATGATCCAAACAATGAGACTGCTGGAGCATTTGTTCCAGCACAAATACTCTATGATGCATTCCATGGGAGATATCACAATTCTGCTGGAGCAATCATTCTACTATTTGTCATTTGGGGTTCATTCTTTTTTGGTGGGCTTTCAATTACTACAAGTGCTGCCAGAGTGGTTTATGCTTTGTCTAGAGACAAGGGAGTTCCTTTTTCACACTTATGGCGGCAACTGCACCCAAAGTACAAGGTTCCTTCAAATGCAGTGTGGCTCTGTGCTGCAATCTGCATTCTTCTTGGTCTCCCAATTTTGAAGGTCAATGTAGTCTTCACTGCAATAACTTCAATATGTACTATTGGATGGGTTGGTGGTTATGCAGTTCCTATCTTTGCAAGGCTTGTGATGTCTGAGAAGAACTTCAAGCCCGGGCCATTTTATTTAGGCAAAGCAAGAAGACCAGTCTGTCTGGTGGCATTCCTATGGATTTGTTACACATGTTCTGTATTCCTTTTGCCAACTCTGTACCCAATTACTTGGGATACTTTCAATTATGCACCAGTTGCTTTGGGGGTAGGTTTGGGTCTAATAATGCTTTGGTGGCTTTTAGATGCTAGAAAATGGTTCACAGGGCCAGTTAGGAATATTGATATTCAAAATGGCAAAGTCTAA 1539 0.4191 MDSAEKRLNELGYKQELRREMTLFKTLAISFSTMTLFTGITPLYGSSLQYAGPATLVWGWIVVSFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGIGTQAYAGSQTLQSIILLSTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIALIDIVSIWWQVIGGIVIVIMLPLVALTTKSASFVFTHLELAPESTGVSSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPIAILGSIGIITVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQILYDAFHGRYHNSAGAIILLFVIWGSFFFGGLSITTSAARVVYALSRDKGVPFSHLWRQLHPKYKVPSNAVWLCAAICILLGLPILKVNVVFTAITSICTIGWVGGYAVPIFARLVMSEKNFKPGPFYLGKARRPVCLVAFLWICYTCSVFLLPTLYPITWDTFNYAPVALGVGLGLIMLWWLLDARKWFTGPVRNIDIQNGKV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1766 512 Pfam Amino acid permease 23 481 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gso4g1766 512 PANTHER AMINO-ACID PERMEASE BAT1 1 512 - -
Gso4g1766 512 Gene3D Amino acid/polyamine transporter I 16 499 - -
Gso4g1766 512 PIRSF AA_transporter 4 511 - -
Gso4g1766 512 PANTHER OSJNBB0086G13.12 PROTEIN 1 512 - -
Gso4g1766 512 ProSitePatterns Amino acid permeases signature. 51 82 IPR004840 GO:0006865|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1766 Gso-Chr4 47788371 47792034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1766 70 505 Organic Solute Cotransporters AT2G01170 41.743 3.36e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1766 - - gmx:100814670 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1766 4 47788371 47792034 Gso4g1766 4 47788371 47792034 ECH