Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1749 ATGGTATATCCCACCCAAACTACTCCGTCTCCAGAAGGCACGTGTGAGGCTGCACCAAATGATGAAGTTAATGATGTGAAGACTCTGACAGAAAGATTATCTGCTGCTCTTTTAAACTCTAGTGCCAAAGAAGATTTGGCAAAGCAGCATGCTAAAGTTGCGGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAATTATTGATTCTTAAACAACAACTCGACACTGCAAAACAGAAAAACTCAGTTCTTGAAGACCAAGTTAGTCATCTTAATGAGGCACTCAAGGAGTGTATGAGGGATCTTCAACAAGCTAAAGAAGAACAAGAGCAAAAGATTCATGAGGCTCTAACAAATAACTCTTACGGCTTGGAATCCAAAAAACCCGATCATGAGTGGAAAGTTGTTGATGCTGCTAAAGCAGATGATGCTGCTTCATCAGTTCATTTGGAACTTCAGCAGAGGCTTGGGGATAAGGAGAAAGAGAATTCAAGTCTTAAAATAGAGCTACAGTCTCAACTTGAGGAATTAAAGTTCAGGACCATAGAAAGGGATTTGAGTACTCAGGCTGCTGAAGCAGCAAGCAAGCAACATTTGGAGAGTATAAAGAAGGTGGCTAAGCTAGAAGCTGAGTGCCGTAGACTGAAAGCTATGGCTCGCAAAACATTATCTGCTAATGATCACAGGTCTGTAGCTGCCTCTTCAGTTTATGTAGAGTCTTTTACTGACAGCATGTCAGATATTGGAGAGAGGCAATTGGTAGTTGAAAGTGATATGCAAAAATTAGGAGGTTGGGATGTGAGTGAAGGTGAGCCAAACCACCATGATTCATGGCCATCAGCTTTAATCAAGGAACTTGATCAATTTAACAATGAAAACACCGCTGGAAAAAATAGTATGGTCTTTTCAACCGAGATCAATCTGATGGATGATTTCCTTGAGATGGAAAGGCTTGTTGCACTGCCAGATACTGAAAGTGTAAGCAGTTTTCCTGTGGAACGTACTGCATCTGACCAACTCAATGTTGGCTGTGGAACAAAGAATGCTGAAGTGGAAGCTATCGTTCAAAAGAATGCTGCACTGGAGAAGAAACTAGAGAAAATGGAGGCAGAGAAACTTGAGCTAGAGATGGATCTAACCGAGTGCCAAAAGCAGCTTGAAGCATCACTGAGTAGGATAAAGGAAGTGGAGCTGGAGGTAGTAGAGCTCCAAACTAAGTTGGCTCTTGCAAACAAATCAAACGAAGAAGCATACGAGAAACTAAAAGCAACTCAAGAAAAGAAAGAGATAGATGAGTCAAAACTCAGAGTTGCTCACACTGAAGCAGAAGAATTGGTTTCAAAAATTTGTTCATTAGAGGAAGAGATTGAGAAAGAGCGAGCTTTGTCCACTGAGAATTTGGCCAAGTGTGGAAAGTTGGAGGATGAGCTCTTGAGGATAAAGAATGAAGCTCAACTCCAAAAGGACACTGAGATTCTTTATGGAGAAGGTGCTAATAGTGAGTTAAAGCAGGAGAAGGAACTAGCATTGGCTACAAGTAAATTTGCTGAATGCCGAAAAACCATCGAATCTCTTGGACTGCAGTTGAAGTCCCTTGCAACATTGGAAGACTTTTTACTTGATTCAGAGAGCCCTATGGAGTTAGCTTGTGAAGTTACACCAGGTTCCCAAAATGGTGGTGAGCAGTTGAAGAAGTTACATAAAGGTGATTTGAGTTTGTCCAAAAGAGATTCTGAGCCATTAGTTTCACTAAACCCATCTATTACTCATGAAAAAACCCGTTATAGTTTTGGTAGGTTCAACCAAAGAAGCAAGAGTGTAAGCAAAACAAGAAGTCACTGA 1845 0.4119 MVYPTQTTPSPEGTCEAAPNDEVNDVKTLTERLSAALLNSSAKEDLAKQHAKVAEEAVSGWEKAENELLILKQQLDTAKQKNSVLEDQVSHLNEALKECMRDLQQAKEEQEQKIHEALTNNSYGLESKKPDHEWKVVDAAKADDAASSVHLELQQRLGDKEKENSSLKIELQSQLEELKFRTIERDLSTQAAEAASKQHLESIKKVAKLEAECRRLKAMARKTLSANDHRSVAASSVYVESFTDSMSDIGERQLVVESDMQKLGGWDVSEGEPNHHDSWPSALIKELDQFNNENTAGKNSMVFSTEINLMDDFLEMERLVALPDTESVSSFPVERTASDQLNVGCGTKNAEVEAIVQKNAALEKKLEKMEAEKLELEMDLTECQKQLEASLSRIKEVELEVVELQTKLALANKSNEEAYEKLKATQEKKEIDESKLRVAHTEAEELVSKICSLEEEIEKERALSTENLAKCGKLEDELLRIKNEAQLQKDTEILYGEGANSELKQEKELALATSKFAECRKTIESLGLQLKSLATLEDFLLDSESPMELACEVTPGSQNGGEQLKKLHKGDLSLSKRDSEPLVSLNPSITHEKTRYSFGRFNQRSKSVSKTRSH* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1749 614 PANTHER FILAMENT-LIKE PLANT PROTEIN 2 603 - -
Gso4g1749 614 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 2 603 - -
Gso4g1749 614 Coils Coil 192 226 - -
Gso4g1749 614 Pfam Filament-like plant protein, long coiled-coil 43 140 IPR008587 -
Gso4g1749 614 Pfam Filament-like plant protein, long coiled-coil 146 224 IPR008587 -
Gso4g1749 614 Pfam Filament-like plant protein, long coiled-coil 274 329 IPR008587 -
Gso4g1749 614 Pfam Filament-like plant protein, long coiled-coil 337 535 IPR008587 -
Gso4g1749 614 Coils Coil 352 444 - -
Gso4g1749 614 Coils Coil 150 177 - -
Gso4g1749 614 Coils Coil 61 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1749 Gso-Chr4 47615300 47619418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1749 - - gmx:100810372 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1749 4 47615300 47619418 Gso4g1749 4 47615300 47619418 ECH
Gso4g1749 4 47615300 47619418 Gso6g1333 6 13053931 13058502 GST