Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1673 ATGGCCATCAGCCATGAAACTTGGGCTTTCATTTTCGGTCTTCTAGGCAACGTGATCTCCTTTATGGTGTTCCTTGCTCCATTACCAACTTTTTACCAAATCTACAAGAAAAAATCATCCGAAGGGTTTCAATCACTACCTTATGTTGTTGCACTGTTCAGTTCAATGCTCTGGATCTATTACGCACTTGTGAAAAAGGATGCTAGCCTCCTTCTAATTACTATTAACTCCTTTGGGTGTGTGATAGAGACAATTTACCTTGCAATCTTCCTTGTTTACGCCCCAAGCAAAACCAGGCTTTGGACCATCAAGCTTCTTCTCATGTTGAATGTTTTTGGGTTTGGAGGGATGCTTCTTTCAACACTATACCTTACGACGGGTTCCAAACGTCTTTCTGTGATAGGATGGATTTGCCTTGTTTTCAACATAAGCGTTTTTGCTGCTCCACTTTGCATCATGAAACGTGTCATAAAGACGAGGAGTGTGGAATTCATGCCTTTCAGTTTGTCCTTGTCTTTGACCATAAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAAGGACTACTACATCGCACTCCCAAATACTCTTGGGTTTCTATTTGGCATAATCCAGATGGTGCTGTATTTGGTTTATAGAAACGCCAAGCCACAAACATTGGAGGAGCCAACGAAGGTTCAGGAACTAAATGGTCATATTATTGACGTTGTGAAGCCAAATCATGCAACAAAAAATGGTCATGTGCCTGTGATTGAGATAGCTAGCAGTGTGTGA 777 0.4157 MAISHETWAFIFGLLGNVISFMVFLAPLPTFYQIYKKKSSEGFQSLPYVVALFSSMLWIYYALVKKDASLLLITINSFGCVIETIYLAIFLVYAPSKTRLWTIKLLLMLNVFGFGGMLLSTLYLTTGSKRLSVIGWICLVFNISVFAAPLCIMKRVIKTRSVEFMPFSLSLSLTINAVMWFFYGLLLKDYYIALPNTLGFLFGIIQMVLYLVYRNAKPQTLEEPTKVQELNGHIIDVVKPNHATKNGHVPVIEIASSV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1673 258 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 249 - -
Gso4g1673 258 PANTHER RAG1-ACTIVATING PROTEIN 1 4 249 - -
Gso4g1673 258 Gene3D - 11 98 - -
Gso4g1673 258 Gene3D - 129 225 - -
Gso4g1673 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Gso4g1673 258 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1673 Gso-Chr4 46663353 46666208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1673 1 239 Miscellaneous Gene Families AT5G50800 58.159 1.13e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1673 K15382 - gmx:100790580 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1725 5 40527198 40529753 Gso4g1673 4 46663353 46666208 PCT
Gso8g0084 8 796562 799080 Gso4g1673 4 46663353 46666208 PCT
Gso4g1673 4 46663353 46666208 Gso5g1725 5 40527198 40529753 PCT
Gso4g1673 4 46663353 46666208 Gso8g0084 8 796562 799080 PCT