Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1629 ATGAACACTAGCAAACTCAGTGACACCCAAGTTGTTTCTGTGAAGCAAGAAAGAAAAATCAACTTAGGATGGAGAAACAAGAAAACAAAGGTTTTAAAAGATGTGATGGAAAGTGATTTTTGGAGCAATGTTCCCCAGCGATTGCGAACAAAGAGGAAGAGTAAATTCAATGGCAAGGAAGCACTTTCTACACCCAAGGTAGTGCTTTCTAAATCGAAGGAAACAATTTCTAGATCCAATAAAGCACTTTCTACACTCAAGGAAGCTCTTTCTAGACCCAATAAAGCACTTTCTACACCTAAGGAAGTGCTTTCTACACTGAAGGAAGCACTTTCTAGACCCAAAGAAAAGCTAAACAGTGGAGATTTTGATATTTACTTGAAGAAAATATGGAAGATTTTCTCAGGAGATAGGTTGAGGCACTTTACATGCTTTGACAGCTTATGGTTTAGTCTTTACAGGGCCGCTCCATCTAAAGACAAGGTGCTTACTTGGATTAAAAAGGAACCTATTTTCTCCAAGTCATATGTTTTTGTTCCTATAGTCTGCTGGGGTCATTGGAGCCTTTTGATCCTGTGCCATTTTGGTGAAAGCTTGGAATCAACCACCAAATCACGATGCATGTTGTTGCTGGATTCTCTTGAAATGACCAATCCTAGACGGCTCGAACCCGAGATTAGAAGATTTGTATTAGATATTTATAAAACAGAGGACAGACCTGAGGCTAAGCATCTTGTATCTCAAATTCCTTTTTTGGTGCCCAAGGTGCCACAACAAAGAGATGGTAATGAATGTGGATTTTTCATCCTCTATTTCATTAATTTGTTTTTGGAGCATGCACCTGATAATTTTAGCATGGAGGGATATCCTTACTTTATGAAAAAAGATTGGTTTAGCTTTGAAGACCTGGATAGATTTTATGAGAGACTTGATTCACTGAATTAG 945 0.382 MNTSKLSDTQVVSVKQERKINLGWRNKKTKVLKDVMESDFWSNVPQRLRTKRKSKFNGKEALSTPKVVLSKSKETISRSNKALSTLKEALSRPNKALSTPKEVLSTLKEALSRPKEKLNSGDFDIYLKKIWKIFSGDRLRHFTCFDSLWFSLYRAAPSKDKVLTWIKKEPIFSKSYVFVPIVCWGHWSLLILCHFGESLESTTKSRCMLLLDSLEMTNPRRLEPEIRRFVLDIYKTEDRPEAKHLVSQIPFLVPKVPQQRDGNECGFFILYFINLFLEHAPDNFSMEGYPYFMKKDWFSFEDLDRFYERLDSLN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1629 314 SUPERFAMILY Cysteine proteinases 113 292 IPR038765 -
Gso4g1629 314 Pfam Ulp1 protease family, C-terminal catalytic domain 161 301 IPR003653 GO:0006508|GO:0008234
Gso4g1629 314 ProSiteProfiles Ubiquitin-like protease family profile. 97 276 IPR003653 GO:0006508|GO:0008234
Gso4g1629 314 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 63 313 - -
Gso4g1629 314 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 63 313 - -
Gso4g1629 314 Gene3D Adenoviral Proteinase; Chain A 62 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1629 Gso-Chr4 46060794 46063293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1629 - - gmx:100780621 640.958