Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1617 ATGAAACGGTTTTTCAAAGTGGTGGAGAAAGATTCAGATGGGTCTGTGAAGAAGCCAAGAGAGAATGATTCGGAGGCTGAAGAAAGTAATGAGAAGAAGGAGCCGTTGAAGTTTATGACTTGGAATGCCAACAGCTTTCTCCTTCGAGTCAAAAACAACTGGCCCGACTTCACCAACCTCATCACCACTTTTGATCCTGATCTCATTGCCATACAGGAAGTGCGGATGCCTGCTGCTGGTGCCAAGGGCGCGTCTAAAATTCAGGGAGAAATAAAAGACGATACAAGCGCGGCCAGGGAAGAAAAGAAGATTTTGACACGTGCACTTTCTGCTCCACCTTTTGGGAACTATCACGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCACTACTGGTGAAAAAATGCTTCAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAATTAGCTTCAAAGCATGAACCAGATGGTCGAGTAATCCTAGTTGAATTTGAAACACTTCGTTTATTGAATACATATGTACCAAATAATGGATGGAAAGAGGAGGCAAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGGATACTGGAATTTGTTACACAAAGTTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCAGACTTTTTCAGTGTGGCAAAACTCAATGGTTATATTCCTCCAAATAAAGAGGACTGTGGGCAGCCTGGGTTTACCTTGTCTGAAAGAAAACGGTTTGGTACCATTTTAAGAGAGGGGAAGCTGGTGGATGCCTACAGATTTCTGCATGAAGATAAGGACATGGAGCGAGGTTTCTCATGGTCTGGAAACCCAGTGGGAAGGTATCGTGGAAAACGAATGAGAATAGACTACTTTTTAGTTTCAGAGAAGCTAAAAGAAAGGATTGCTGCATGTGAAATGCGTGGACATGGGATAGAGTTAGAAGGTTTCTATGGAAGTGATCATTGTCCAGTTACCTTGGAGCTCTCTCCTAGTTCTAACTCTCAAAATGAGGATCCAATATAA 1068 0.4232 MKRFFKVVEKDSDGSVKKPRENDSEAEESNEKKEPLKFMTWNANSFLLRVKNNWPDFTNLITTFDPDLIAIQEVRMPAAGAKGASKIQGEIKDDTSAAREEKKILTRALSAPPFGNYHVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKLASKHEPDGRVILVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQSSDKPLIWCGDLNVSHEEIDVSHPDFFSVAKLNGYIPPNKEDCGQPGFTLSERKRFGTILREGKLVDAYRFLHEDKDMERGFSWSGNPVGRYRGKRMRIDYFLVSEKLKERIAACEMRGHGIELEGFYGSDHCPVTLELSPSSNSQNEDPI* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1617 355 Pfam Endonuclease/Exonuclease/phosphatase family 39 336 IPR005135 GO:0003824
Gso4g1617 355 ProSiteProfiles AP endonucleases family 1 profile. 36 345 IPR004808 GO:0004518|GO:0006281
Gso4g1617 355 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 26 347 - -
Gso4g1617 355 CDD Ape1-like_AP-endo 36 343 - -
Gso4g1617 355 PANTHER AP ENDONUCLEASE 26 347 IPR004808 GO:0004518|GO:0006281
Gso4g1617 355 MobiDBLite consensus disorder prediction 1 32 - -
Gso4g1617 355 TIGRFAM xth: exodeoxyribonuclease III (xth) 36 343 IPR004808 GO:0004518|GO:0006281
Gso4g1617 355 Gene3D Endonuclease/exonuclease/phosphatase 5 345 IPR036691 -
Gso4g1617 355 SUPERFAMILY DNase I-like 36 343 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1617 - - gmx:100817167 732.635