Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1608 ATGGCTACCAGTGGAGGCGATGAGGGGCAGAACAACCCTGCCCTCGACCCGGATTTGGATGCTCCGGATGACCCGGATCACGAGTTCGCTGAGTTCGGGTCGGGTTGCTTCTGGGGTGCTGAGTTGGCCTTTCAGCGAGTTGTGGGTGTGGTGAAGACTGAGGTTGGTTACACTCAGGGTCACACTCCGGATCCGAATTACAAACTGGTTTGCACCGGAACCACTAACCACGTTGAAGTGGTTCGGGTCCAGTTCGACCCGAAGGTTTGCCCCTACAATGATCTACTTGCTCTCTTTTGGTCTCGGCATGACCCCACTTCCATCAACCGTCAGGGCAATGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACAACGATACCCAAGCTCGTTTAGGCCAGGAATCAAAAGATGCAAAACAATTGGAACTGAAGGAGAAGATTGTGACAGAAATACTTCCAGCAAAGAGGTTTTACAAAGCAGAGGAATACCATCAACAATATCTGGAGAAGGGTGGAGGTCAAGGCAACAAACAATCCGCAGAAAAAGGCTGCACTGATCCCATCAGGTGCTATGGCTGA 585 0.506 MATSGGDEGQNNPALDPDLDAPDDPDHEFAEFGSGCFWGAELAFQRVVGVVKTEVGYTQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKVCPYNDLLALFWSRHDPTSINRQGNDVGAQYRSGIYYYNDTQARLGQESKDAKQLELKEKIVTEILPAKRFYKAEEYHQQYLEKGGGQGNKQSAEKGCTDPIRCYG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1608 194 SUPERFAMILY Peptide methionine sulfoxide reductase 24 175 IPR036509 GO:0008113
Gso4g1608 194 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 29 172 IPR002569 GO:0008113
Gso4g1608 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Gso4g1608 194 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 8 194 - -
Gso4g1608 194 MobiDBLite consensus disorder prediction 1 26 - -
Gso4g1608 194 Coils Coil 126 146 - -
Gso4g1608 194 Gene3D Peptide methionine sulphoxide reductase MsrA 17 194 IPR036509 GO:0008113
Gso4g1608 194 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Gso4g1608 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 8 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1608 Gso-Chr4 45729183 45730990 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1608 K07304 - gmx:100527085 392.504