Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1570 ATGGACGCAGATTCTGAATATCGTGAAAATAGTGATTCTTCATTTGTTTGGGATGAGAATTCACAACTTTACTTCCACGCCAGTAGTGGATTCTACCATGACCCTAATGCTGGCTGGTACTATAGCAACAAAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTGCTTTTAGGTACCAAAGAGGATGATAATGTTGAAATGTATCAGTGCAAGGAAACTACAAAAGAAAATCCTCAACAAATATATGATGGTAACAACAATGAGGATCACCCTTCCTTCCTTGAAAGTAAATTTGAAACTAACCAACAGATAGGAACCCTGGCTGATGAAGCACCTGCTGATACCCCAAATTCCGTGAGTAGTCCAACTTGTGAAGATCCTCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATCGATCTTTACTTATCTGGCTACAAGAACATAGAAGTTAGTGAAGCCGATGCAGTGACAGTGCCATTTGAAACAGATGATAGATATAACTCGTTAGCAGCTGATGCTTACAGCAAAAGTTACGAAGTGGAAGGCGAGTGGATCCTAGAACCAGGAGATGAAAATGGCTTAGCTTATAATAGAAGTACTGTGGATGAAGGTATACCTTATAGCAACACTTATGAACTGGAAGAAGGTGAATGGATCCCAGACATGGAGGACGAATATGGCATAGCTGATAGAAGTACCATAGATGAAGCCATCTCATTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATCTGGTTTCAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGGGATCCAAAAGAGATGGAAAAGATAAGATGGCAAGGTTGGTTGGTAGACTGGTTAAACCATCTGCAAAGCAACATCCATCTATCCCTTTCAGTGGAGGGAAATTAAGATCTGCTCCCATCTGTGAAGCACATCTCGATCTGGTACGAGTTAAAACAGGACAAGTGTACAGATTGCGAAATCCTAGCGCAAAATATGTGGCTTCATTATCAACTTATGATTCTTCCAATCCAACAGAACATTGGGATTTTCCCCAGTTATCACCTAATAGAAAAATCAAACGTCACTCTAAGTCCAGTGAAAGCTCTGCTTCAGCTTTGGATGAAACCCCTATTGAGAAGGATTTGTCTGCATTGCCAAGTCAGCTCTCTGCCTCTAAGAAAATAAAACATCAATACAGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGTCGGACATTTATAATACACCATCTTCACCTGTTGATGATTGTCCACAAGAAGCTACGGCAGAGGCCTTGGAGATGTCATTTGGAGCTGGTAGTTATGCTAGAAAACTTCTAAAAAGCATGGGTTGGAAGGAGGGGGAAGGGCTTGGCAGTTCTACGAAGGGCTTGGTAGAACCTATTCAACCAGTTGGAAACGTTGGTACTTCTGGTTTGGGATGGTCTCGTTGA 1527 0.4211 MDADSEYRENSDSSFVWDENSQLYFHASSGFYHDPNAGWYYSNKDGAYYKFEDGNYVLLGTKEDDNVEMYQCKETTKENPQQIYDGNNNEDHPSFLESKFETNQQIGTLADEAPADTPNSVSSPTCEDPPPPPSEWLEDTLIDLYLSGYKNIEVSEADAVTVPFETDDRYNSLAADAYSKSYEVEGEWILEPGDENGLAYNRSTVDEGIPYSNTYELEEGEWIPDMEDEYGIADRSTIDEAISLDEEKWRAQYGQVTESGKDLVSEVPIVDLWDWEMVTGSKRDGKDKMARLVGRLVKPSAKQHPSIPFSGGKLRSAPICEAHLDLVRVKTGQVYRLRNPSAKYVASLSTYDSSNPTEHWDFPQLSPNRKIKRHSKSSESSASALDETPIEKDLSALPSQLSASKKIKHQYRDRAAERRILHGGFGMGPGQKNLSDIYNTPSSPVDDCPQEATAEALEMSFGAGSYARKLLKSMGWKEGEGLGSSTKGLVEPIQPVGNVGTSGLGWSR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1570 508 PANTHER RNA-BINDING PROTEIN 8 506 - -
Gso4g1570 508 CDD OCRE 13 54 - -
Gso4g1570 508 Pfam OCRE domain 12 53 IPR041591 -
Gso4g1570 508 MobiDBLite consensus disorder prediction 111 134 - -
Gso4g1570 508 ProSiteProfiles G-patch domain profile. 463 508 IPR000467 GO:0003676
Gso4g1570 508 MobiDBLite consensus disorder prediction 365 380 - -
Gso4g1570 508 MobiDBLite consensus disorder prediction 352 390 - -
Gso4g1570 508 Pfam G-patch domain 465 505 IPR000467 GO:0003676
Gso4g1570 508 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 8 506 - -
Gso4g1570 508 SMART G-patch_5 461 507 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1570 Gso-Chr4 45211170 45216035 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1570 - - gmx:100806477 1001.12