Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1559 ATGGGCCCTACAGAAGTTGTGTATTTATCTAGTGATGATGAAAGTGAAAAGGAAGTTGCTTTCAAAGCTGTTAAGTTGGAGGAAGATTTTGTTTTGGATGCAAAACAATATAATGAGACTAACAAAGGTCAACTAGCCAAGCACAAGAGATCTCAAAGTCATACTACTGGACAAGATTCTGAAGAAAATTTAAGTTCTAATGGTCCAAGTACAGGTCATAGTAACTCCAGTGTGTTGGAGCAGGGACCGTCGCCTGTTGATGACACAGGCATTTCTTATGCATCATCCATTGGTGTAGCACCCCTGTGTAGGCAGTTTTGGAAAGCTGGAAACTATGATGATGGACTTGGTTCTAAAGTCACCGTCCAAAATGCCAAAAATTATCTACATGTGCACCCCATGTTCCTTCACTCAAATGCAACTTCGCATAAGTGGGCATTTGGTGCCATAGCAGAGCTTCTTGATAATGCAGTTGATGAGATCCAAAATGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAATCCAAGGGATGGAAGTCCAGCATTGTTGATTCAAGATGATGGTGGTGGAATGGATCCGGATGCAATGCGTCGTTGCATGAGTTTTGGATTTTCAGATAAGAAGTCACAGTTTGCTATTGGACGGTATGGAAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGTCATAGTCTTCAGTTGCCATCTAAATAATAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATATTTGATAAAAACACAGCTTGACAGAATAGTAGTACCCATGGTGAATTATGAGTTTGATACATCAACTGGATCATTGAAAATATTAAATGGCAATGAGCATTTTGTGTCTAATTTATCCTTGCTGTTGCGTTGGTCACCATATTCATCAGAAGCAGATCTTCTGAAACAATTTGATGACATTGGATCTCATGGTACTAAAGTTATTATCTATAATTTGTGGTGCAATGATGATGCAAATTTGGAGCTAGACTTTGATACAGATCCTACGGATATTCGTATTGCTGGGGATGTCAAGCAGATTGATACACTTAAAGCCTGGAAAAGTGTAAATGAGGAGCACATTGCTAATCGGCTTCGTTACTCTTTACATGTATATATGTCCATATTATACTTGAAGATACCAGAAAGTTTTCAAATGATATTGCGAGGGCAAGTTGTGAAGCCACACAACATTGCTGATGATCTTAAGTTCCCTCAATTTGTTAAATATGCACCAGTAATTGGTGGATCCGTAAAGGGAACAGCTTTGACAGTCACAACAATTGGATTTCTTAAGGAAGCTCCTCAAGTCAATATCCATGGTTTCAATGTATATCACAAAAATCGGCTTATACTGCCATTTTGGCAGGTTGTAAGCTATTTGGACAGTAGGGGAAGAGGAGTTGTTGGAATCCTGCAAGCAGATTTTATTGAGCCAACTCATAACAAACAAGATTTTGAGAGAACTTCCCTGTTTCAAAAGCTTGAAGGGCGATTGAAGGAGATGACATGGGAATACTGGGACACACATTGTACATTGTTTGGGTATAAGGATAAGGACAAGAAGAAGCTTCCACCGAGGGTTACGTCAATGCAGAAACCACTTGCTATAGAAAAACCGGTCATGCTGAACAGAAGTTGCTCCCCTGTTGTCAATACAAAAATAGAATATGGGAATTCTGAACAGTGTTCCACAAAACTGCAAATAAGATCCGAACAAGGTTCTCATAATAAGAGGAAGACACATGAACTGGTAGACCTTCAGAATACGGAAAAACATGCAAGGACAGAGAATGTAACCTGTGTTGGTTTCAGTCAGAATAAACAGATCATTGCTACTCCAGCTGACCAGGTGTTCGACCGAAAGACTATGCACTTGGTGCAACAAAACAAGAAACTGCATGCAAAATGTTTAGAATTTGAAAAGACAGGAGAAGAACTTAATCTCAAGGTGACGATGCTTAAAAGTGAAATACAAGAAGCTCAAGATGAGTATAAACGGCTTTTGGCTGAAGTGAAGTCCCTAGACCTGAAAGAAGAGTAG 2067 0.3948 MGPTEVVYLSSDDESEKEVAFKAVKLEEDFVLDAKQYNETNKGQLAKHKRSQSHTTGQDSEENLSSNGPSTGHSNSSVLEQGPSPVDDTGISYASSIGVAPLCRQFWKAGNYDDGLGSKVTVQNAKNYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDEIQNGATFVIVDKTSNPRDGSPALLIQDDGGGMDPDAMRRCMSFGFSDKKSQFAIGRYGNGFKTSSMRLGADVIVFSCHLNNRILTQSIGLLSYTYLIKTQLDRIVVPMVNYEFDTSTGSLKILNGNEHFVSNLSLLLRWSPYSSEADLLKQFDDIGSHGTKVIIYNLWCNDDANLELDFDTDPTDIRIAGDVKQIDTLKAWKSVNEEHIANRLRYSLHVYMSILYLKIPESFQMILRGQVVKPHNIADDLKFPQFVKYAPVIGGSVKGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILPFWQVVSYLDSRGRGVVGILQADFIEPTHNKQDFERTSLFQKLEGRLKEMTWEYWDTHCTLFGYKDKDKKKLPPRVTSMQKPLAIEKPVMLNRSCSPVVNTKIEYGNSEQCSTKLQIRSEQGSHNKRKTHELVDLQNTEKHARTENVTCVGFSQNKQIIATPADQVFDRKTMHLVQQNKKLHAKCLEFEKTGEELNLKVTMLKSEIQEAQDEYKRLLAEVKSLDLKEE* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1559 688 MobiDBLite consensus disorder prediction 40 87 - -
Gso4g1559 688 Pfam Morc6 ribosomal protein S5 domain 2-like 375 515 IPR041006 -
Gso4g1559 688 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 22 679 IPR045261 GO:0016887
Gso4g1559 688 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 148 242 - -
Gso4g1559 688 MobiDBLite consensus disorder prediction 57 87 - -
Gso4g1559 688 Coils Coil 652 686 - -
Gso4g1559 688 Gene3D - 123 336 IPR036890 -
Gso4g1559 688 MobiDBLite consensus disorder prediction 42 56 - -
Gso4g1559 688 PANTHER PROTEIN MICRORCHIDIA 6 22 679 - -
Gso4g1559 688 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 146 348 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1559 Gso-Chr4 45068701 45082313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1559 - - gmx:100795667 1389.4