Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1555 ATGGCACAAGCACACGCTCTCTTTTCTCCTTTCAATCCTCGCCTTCTTCCTTCTTCCTCCCCCATTCTCCGACGCCGTTTCTTTTCCCTTCCAATTTCTCCGTTAACTCACCGGACCGTGATTGCCTCCGAAAACGTCGCCGTTTCGCCTGATGCCGCCTCGTCTACTCACTCTCTCCCCCAGGTGATTGAAACCCTGATTTCCGGAGTGGATTTATCGGAGGAGGAAGCCGAAGCGTGTCTCAACTTGCTGCTGCACGAACCAAACGAGGCCTTAATCAGCGCCCTTCTCGTGCTTCTCAGAGCCAAAGGAGAGACCTATGAAGAAGTTGTGGGGTTGGCGAGGGCAATGTTTAAACACGCGACGAAGGTGGAGGGTTTGGACGATGTGGTGGACATCGTGGGAACCGGAGGGGACGGTGCCAACACGGTCAACATTTCGACCGGTGCTTCGATTCTTGCCGCGGCTTGCGGTGCCAGAGTTGCAAAGCAAGGGAGCCGTTCCAGTTCTTCTGCGTGTGGGAGTGCCGATGTGTTGGAAGCTTTGGGAGTGGTCATTGACTTAGGTCCACAGGGGGTGAAGAGGTGTGTGGATGAAGCTGGGATGGGGTTTATGATGTCTACAAAGTATCACCCATCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAGATAAAAACTATATTCAATATATTGGGTCCAATGTTGAATCCAGCACATGCACCTTTTGCCGTTGTTGGAGTATACACAGAGGACTTGGTCCTTAAAATGGCCAAAGCACTCAATAGATTTGGCATGAAACGAGCCTTAGTTGTCCACTCTGAAGGTTTGGATGAAATGAGTCCTCTTGGACCTGGTATAGTGCTTGATGTTATGGCTGACAGGGTTGATAAGTTTGCATTTGATCCCTTGGAGTTTGGCATTCCACGGTGCAATATTGAAAGCTTAAAAGGTGGTGGTCCAGAATACAATGCAGAGGTTTTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCAATTGCAGATGCTTTGATTCTCAATGCCGCAGCAGCTCTCTTAGTCAGTGGCTGTGTAAGTAACCTAGCTGAAGGGGTTTCTGTGGCACGTGAAACACAACAATCAGGAAAGGCTCTGAAAACACTCAACCTGTTGAAGGATGTCTCAAATAACATCAAAGATGAGTTGGGCATGGATGCCTGA 1200 0.4925 MAQAHALFSPFNPRLLPSSSPILRRRFFSLPISPLTHRTVIASENVAVSPDAASSTHSLPQVIETLISGVDLSEEEAEACLNLLLHEPNEALISALLVLLRAKGETYEEVVGLARAMFKHATKVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGARVAKQGSRSSSSACGSADVLEALGVVIDLGPQGVKRCVDEAGMGFMMSTKYHPSMKIVRPVRKKLKIKTIFNILGPMLNPAHAPFAVVGVYTEDLVLKMAKALNRFGMKRALVVHSEGLDEMSPLGPGIVLDVMADRVDKFAFDPLEFGIPRCNIESLKGGGPEYNAEVLKRVLGGERGPIADALILNAAAALLVSGCVSNLAEGVSVARETQQSGKALKTLNLLKDVSNNIKDELGMDA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1555 399 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 59 124 IPR036320 -
Gso4g1555 399 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 42 125 - -
Gso4g1555 399 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 128 392 IPR035902 -
Gso4g1555 399 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 45 397 IPR005940 GO:0000162|GO:0004048
Gso4g1555 399 Pfam Glycosyl transferase family, a/b domain 128 378 IPR000312 GO:0016757
Gso4g1555 399 Pfam Glycosyl transferase family, helical bundle domain 61 121 IPR017459 -
Gso4g1555 399 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 126 396 IPR035902 -
Gso4g1555 399 Hamap Anthranilate phosphoribosyltransferase [trpD]. 61 387 IPR005940 GO:0000162|GO:0004048
Gso4g1555 399 TIGRFAM trpD: anthranilate phosphoribosyltransferase 63 383 IPR005940 GO:0000162|GO:0004048
Gso4g1555 399 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 45 397 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1555 K00766 - gmx:100794615 748.429