Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1488 ATGGCTGGAGGGTTGCTTGGAGATAACCTTGGATTGAAGGAAGATGTGATCAAGAGGGTGTGTGGTTTGGCCTCCAAAGCTCACAATCACAAGTCAACGGACAAGCTCTACTTTTACGATAAGGTTCGGACTTCTTCGGGGACATACCATGTTTTCAGCTTCTCGGGATCTTGGGATCCCGCTGAATGGTTTTTTAGCAAACCCTTTGGCGGATCCAAGATAGATCCTACCCAATTTCCTTCACTCAGAAGTATTGGTAACGATGAACCTGCTTTGGTGAACGAAGGCTTCGCAAAGAGATTCGATCGCGTATTGAAAACTAGCTTTAAAGCCGAGGTGAATAAGGCTATTGGAGATGGGAAGCAAGTAGTGTTTACGGGGCACTCCTCTGGTGCTGCAATAGCCATTCTTGCTACCTTTTGGGCATTGGAAGAGTATCTTAACCCTACAAAAATCCAAAAACCCACGCCACCCTTTTGTGTCACTTTTGGGTCTCCCTTAATTGGCAATCATATATTCTCTCACGCTTCAAGGAGAGAAAATTGGTCTCGCTATTTCATACACTTTGTTTTGAGATATGACATAGTGCCAAGGATTTTGCTTTCTCGCTTGGCTTCTATTAAGCAAACTTTTGGTTCTGTTCTCCAATTCTTGAATCCCAATTCCAAAACTTCCACCCAGGATCCAACAAGGGCTAGTTTAATTTCTGAATTTTACAAAACTGTGATGACAAACGCAGCGAGTGTTACAAGCCATGCTGCGTGTATTCTCATGGGAAGCACAAGTTTGTTACTTGGGACAGTGGCGAATTTTGTTGAGTTGAGCCCTTATAGGCCCTTTGGAACATTTATTTTCTGCAACGGAAATGGACAATTGATTGTGGTGAAAAACTCAGATGCTGTTTTGCAACTCTTGTTCCACACTGCTCAGATGAGCGATTTGGCAGAACTTCCAGAAGTTGCCAATGTTAGCATATTGCAACACCAGGCCTATGAGGCTGAATTGGATGATAGCTTGGGAATGCAGAATGTAGTGTACTTGGAGCAACTAGAGCAACTTCCGTTGTCTGCTGATGGTTCTAATAGCGATGTTGCAACAATCAGTGCAGCCTTGGATGGCCTTGGACTGAGCACAAGAGCAAGGCTGTGTCTACGAGCAGCTGGTGAGTTGGAAAAGCAGAAGCTAAAAAATGAGGAGAAAATCAAGAAGGAGATTCAGGAGAAAGCCGTGCCAAGCATGACGAAGCTTCAAAATTACAAAACAACATGTGAGATGCACAAGGGGAAGGGCTATTACGATGCCTTCAAGGTGCAAAATGAGGAAAACGACTTCCAAGCAAATGTGAAGAGGCTTGTGTTAGCAGGGGTATGGGATGAAGTGATTGAGATGCTAAAGAGGTATGAACTCCCAGACGAGTTTGAAGGGAATTCAAAATGGATTGAACATGGAACTGAATTTCGTCGCCTTGTGGAGCCTCTAGACATTGCAAACTATCACCGCCACTTGAAGAATGAGGACACAGGACCTTACATGATAAGGGCCAGGCCAAAACGGTATAGGTACACTCAAAGATGGTTGGAGCATGCTAAAAGGGTGCCAAAACCTGCTCCTATCACTGAATCAACCTTTTGGGCTGAAGTAGAAGAGCTTTATAGCTGGATTAACAGCAAGAGGCATCTTGATGATGAAGTAAAGCAAAGGGTTGTGCAGCTTCAGAAAGACCTTAAAAAGTGGACTGATGATGAGAAGGTACTAACCAAGGATACGTTCTTGAAGGATCCTAACTTTATTAGGTGGTGGGATATTCTACCTCAGGAACTCAGGGTCACTTCCTTCTAG 1839 0.4405 MAGGLLGDNLGLKEDVIKRVCGLASKAHNHKSTDKLYFYDKVRTSSGTYHVFSFSGSWDPAEWFFSKPFGGSKIDPTQFPSLRSIGNDEPALVNEGFAKRFDRVLKTSFKAEVNKAIGDGKQVVFTGHSSGAAIAILATFWALEEYLNPTKIQKPTPPFCVTFGSPLIGNHIFSHASRRENWSRYFIHFVLRYDIVPRILLSRLASIKQTFGSVLQFLNPNSKTSTQDPTRASLISEFYKTVMTNAASVTSHAACILMGSTSLLLGTVANFVELSPYRPFGTFIFCNGNGQLIVVKNSDAVLQLLFHTAQMSDLAELPEVANVSILQHQAYEAELDDSLGMQNVVYLEQLEQLPLSADGSNSDVATISAALDGLGLSTRARLCLRAAGELEKQKLKNEEKIKKEIQEKAVPSMTKLQNYKTTCEMHKGKGYYDAFKVQNEENDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGNSKWIEHGTEFRRLVEPLDIANYHRHLKNEDTGPYMIRARPKRYRYTQRWLEHAKRVPKPAPITESTFWAEVEELYSWINSKRHLDDEVKQRVVQLQKDLKKWTDDEKVLTKDTFLKDPNFIRWWDILPQELRVTSF* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1488 612 Coils Coil 387 407 - -
Gso4g1488 612 Pfam Enhanced disease susceptibility 1 protein EP domain 415 601 IPR041266 -
Gso4g1488 612 Gene3D alpha/beta hydrolase 14 240 IPR029058 -
Gso4g1488 612 PANTHER PROTEIN EDS1-RELATED 1 612 IPR044214 GO:0006952
Gso4g1488 612 Pfam Lipase (class 3) 52 199 IPR002921 GO:0006629
Gso4g1488 612 CDD Lipase_3 51 199 - -
Gso4g1488 612 SUPERFAMILY alpha/beta-Hydrolases 32 222 IPR029058 -
Gso4g1488 612 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1488 Gso-Chr4 43631849 43635039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1488 107 190 Acyl Lipid Metabolism Gene Families AT5G14930 34.524 3.07e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1488 K18875 - gmx:100778851 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1488 4 43631849 43635039 Gso6g1576 6 16349935 16353275 GST