Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1288 ATGGCGAGCTCAGTGGAGAAGGAGGGTGGCGCGAGCGAGGAAACTTTCTCTGTGGAGCTTCCTGCTCCACCTGGTTGGAAGAAGCTGTTCATCCCAAAGAAAGCTGGTACCCCAAAGAAAAACGAGATTGTGTTCACTGCACCAACAGGAGAGGAGATCAATAACAGGAAGCAGCTGGAAAAATATTTGAAAGCACACCCTGGTGGTCCAGCTGTATCAGAATTTGACTGGGGCACTGGTGAGACCCCAAGAAGATCTACAAGAATCAGTGAGAAGGCAAAGGCAGCTCCTCCAATAGAAAGCGAGCCCCCAAAGAAACGTACTAAAAGATCATCAGCTTCACAAAAGGAAACTTCCCAGGAAGAAAAAGAAGAGAAGACAAAGGAAGCGGAAATGCAAGAAGCTGATTACACCACTAAGGATGATAATGATATAGAGAAGGAAAAGGATGTTGTAATGGAAAATCAAGATGTCAAGAGTGTGGAAGATACAGATGTCAACAAATCCACTCATTCTGGAGAAGCTAAAGCTGGAGAAAATGTTGAGGTACCTATTGAAAAGGACAAAGGAATTGAGGTCTCTGAAGTTTTTCTGAGAAAGGATGAAGAAAAGATTGAGCAACCACAGGAAGAGACAAAAGAATATCGTGGATCTGGGGAGCCAGAGAAATTGGAAACATGCACTATTGCTGACAAAAAGGTTGAAGTGGAAGGAGTGAATAAAGAGGAAAACATCAAAAGTACTCGTGAATTTGAAGCTGAGGAAATAGAAGGAACAAAAGTGAATAGTGAAGAATATCACAAGCTTGATGAGATAAACAAGGCTGAAGCAGAGTTGACCATGAATGGCAATCATGGGAGCTGA 864 0.4294 MASSVEKEGGASEETFSVELPAPPGWKKLFIPKKAGTPKKNEIVFTAPTGEEINNRKQLEKYLKAHPGGPAVSEFDWGTGETPRRSTRISEKAKAAPPIESEPPKKRTKRSSASQKETSQEEKEEKTKEAEMQEADYTTKDDNDIEKEKDVVMENQDVKSVEDTDVNKSTHSGEAKAGENVEVPIEKDKGIEVSEVFLRKDEEKIEQPQEETKEYRGSGEPEKLETCTIADKKVEVEGVNKEENIKSTREFEAEEIEGTKVNSEEYHKLDEINKAEAELTMNGNHGS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1288 287 Gene3D - 13 87 - -
Gso4g1288 287 SUPERFAMILY DNA-binding domain 13 106 IPR016177 GO:0003677
Gso4g1288 287 MobiDBLite consensus disorder prediction 98 172 - -
Gso4g1288 287 MobiDBLite consensus disorder prediction 201 223 - -
Gso4g1288 287 Pfam Methyl-CpG binding domain 18 81 IPR001739 GO:0003677
Gso4g1288 287 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Gso4g1288 287 Coils Coil 116 136 - -
Gso4g1288 287 MobiDBLite consensus disorder prediction 64 187 - -
Gso4g1288 287 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 286 IPR039622 -
Gso4g1288 287 MobiDBLite consensus disorder prediction 1 38 - -
Gso4g1288 287 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1288 Gso-Chr4 34690212 34695075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1288 - - gmx:100800976 540.421