Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0932 ATGTTGAGGGGGCTGTTTGTGTTTGGTGGCACGTGCTGCAGGAGATTGACGTTGGCACGACAGTCCACGCAGAAACAGAAACAGTGGTGGGATCATCTTCATCATCATCTTCGCTCCAAAAACCTTCATTGGGCAGGTCTCATGGAGAGTAATGGGAACTCGGTGAAGGATGCTGAGAAACAAATCACCCGTGTTTTGTTTTGTGGACCCCGTTTCCCTGCTTCTCATGAATATACAATTGAGTATTTGCAAAATCATTCACATATCAAGGTTGATGTTCTCCCTTTAGAAGATGTGCCAAAGGATATTGCCAACTATCATGTCTGCATAGTAAAAAACATGAGGCTAGATTCAGAAATAATTTCTCGTGCAGTTCAGATGCAGCTTATAATGCAGTATGGTGTTGGGCTGGAAGGTGTTGATATTGATGCTGCAACAAAGCATGGAATCAAAGTTGCTAGGATACCAGGTGATGTTTCGGGAAATTCAGCTTCATGTGCTGAAATGGCCATATATCTAATGCTGGGTCTCCTCCGTAAGCAAAATGAACTGCAAGTTTCCATACAACAAAAGAAGCTTGGAGAGCCAATTACCGAAACTTTACTTGGGAAAACTATATTCATTTTGGGCTTTGGGAACATTGGAATGGATTTAGCAAAGCGATTGCAACCCTTTGGTGTAAAAGTTATTGCTACAAAGCGGAGCTGGGCTTCATATGCACAACATGCTAGCAAATTAAGCAGAAATGATGCTGAAGATCTTGTTGATGTGAAGGGTAGTCATGAAGATATATATGAGTTTGCAAGGAAGGCTGACATTGTTGTTTGCTGCCTAACATTAAACAGAGAAACGGTTGGTATAATAAACAATAAGTTTATATCTTCTATGAAAAAGGGTGGCCTTCTGGTGAATGTTGCTAGAGGTGGTCTTGTAGACTATGAGGCTGTGATCAACCACCTTGAATCAGGTCATTTAGGAGGGTTAGGCACTGATGTTGCTTGGACTGAGCCATTTAACCCTGATGATCAGATATTTAAATTTAAGAATGTTATCATGACTCCTCATGTTGCAGGCGTTACAGAGCATTCTTATAGATCCATGGCTAAGGCTGTTGGTGATGTCGTTCTTCAACTTCATGCCGGGCTTCCTTTGACAGGGATAGAGTTAGTTAACTGA 1176 0.4167 MLRGLFVFGGTCCRRLTLARQSTQKQKQWWDHLHHHLRSKNLHWAGLMESNGNSVKDAEKQITRVLFCGPRFPASHEYTIEYLQNHSHIKVDVLPLEDVPKDIANYHVCIVKNMRLDSEIISRAVQMQLIMQYGVGLEGVDIDAATKHGIKVARIPGDVSGNSASCAEMAIYLMLGLLRKQNELQVSIQQKKLGEPITETLLGKTIFILGFGNIGMDLAKRLQPFGVKVIATKRSWASYAQHASKLSRNDAEDLVDVKGSHEDIYEFARKADIVVCCLTLNRETVGIINNKFISSMKKGGLLVNVARGGLVDYEAVINHLESGHLGGLGTDVAWTEPFNPDDQIFKFKNVIMTPHVAGVTEHSYRSMAKAVGDVVLQLHAGLPLTGIELVN* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0932 391 CDD 2-Hacid_dh_11 64 384 - -
Gso4g0932 391 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 76 381 IPR006139 GO:0016616|GO:0051287
Gso4g0932 391 Gene3D - 76 380 - -
Gso4g0932 391 Gene3D - 157 359 - -
Gso4g0932 391 PANTHER FORMATE DEHYDROGENASE 1 60 391 - -
Gso4g0932 391 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN 60 391 - -
Gso4g0932 391 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 172 357 IPR006140 GO:0051287
Gso4g0932 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 358 IPR036291 -
Gso4g0932 391 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 296 312 IPR029753 -
Gso4g0932 391 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 94 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0932 Gso-Chr4 11292497 11308443 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0932 - - gmx:100785085 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0932 4 11292497 11308443 Gso4g0932 4 11292497 11308443 ECH