Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0887 ATGGCTATAGGCGTAGCAGTTTCCGGTATGTACACGCTCACTCCAACTCTCTCTTCATTCAAGCACCCCACGCGCCTCTTCTCACGCGCTGCTTTCACTGCAAAGCTTCCACTTCAATTTCGAGCTTCTTCAACGTCCTTCATCGACACCGAAACCAATCCAAGAGAATCCAACGTAGTAGTAGTTGAAAAGGACGTAAGCAGTAGAAGCAGCAATTCGTTGGCTTGTCCCGTATGTTACGATTCCTTGACATGGAACGGTGATCCTGGTTTCTCCGTAGATACTATCACTGGATCTAGTTTTCAATGCAGCACCTGTCAGAAAACATATATTGGTAACCAAACGCATCTCGATCTCACCGCTACAGGTGGAGCTAAGAGCTATGGTGAATCGATGCCAGCTTCCACAGAGCTTTTCAGGGTGCCATTGATATCATTTCTCTATGAGAGGGGCTGGCGTCAAACCTTTTCTGTGTGGGGTGGTTTTCCTGGTCCTGAGAAAGAGTTTGAATTGATGAAGGGTTTCTTAAAGCCAATATTGGGAGGAAATATCATTGATGCTAGTTGTGCAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTGTTTTCTTTCATTGTTGCTCTAGACTACTCAGAAAACATGTTGCAGCAATGTTATGAATTCATTCAGCAGGAAGAAAACTTTCCAAAAGAGAACTTCATCTTGGTTAGAGCAGACATATCTAGGCTCCCCTTTGTTTCCAGTTCTGTTGATGCTGTACATGCAGGCGCAGCTCTCCACTGTTGGCCTTCACCATTAGCTGCTGTAGCTGAAATAAGTCGTGTTTTACGACCTGGAGGTGTATTTGTCGCAACCACTTACATACTTGATGGGCCTTTTTCTGTTATCCCATTTTTAAGTTCCCTGCGGCAGAATGTAAGGCAAGTGTCTGGGAGCTACATCTTTCTCTCTGAACGTGAACTTGAAGATCTCTGCAGGGCATGTGGGCTAGTTGGATTTAAATGCATTAGAAATGGGCTTTTTGTGATGATCTCTGCTACAAAGCCCAGTTAA 1059 0.441 MAIGVAVSGMYTLTPTLSSFKHPTRLFSRAAFTAKLPLQFRASSTSFIDTETNPRESNVVVVEKDVSSRSSNSLACPVCYDSLTWNGDPGFSVDTITGSSFQCSTCQKTYIGNQTHLDLTATGGAKSYGESMPASTELFRVPLISFLYERGWRQTFSVWGGFPGPEKEFELMKGFLKPILGGNIIDASCASGLFSRLFAKSGLFSFIVALDYSENMLQQCYEFIQQEENFPKENFILVRADISRLPFVSSSVDAVHAGAALHCWPSPLAAVAEISRVLRPGGVFVATTYILDGPFSVIPFLSSLRQNVRQVSGSYIFLSERELEDLCRACGLVGFKCIRNGLFVMISATKPS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0887 352 Pfam Methyltransferase domain 186 285 IPR013216 GO:0008168
Gso4g0887 352 PANTHER OS08G0411200 PROTEIN 28 351 - -
Gso4g0887 352 CDD AdoMet_MTases 183 291 - -
Gso4g0887 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 341 IPR029063 -
Gso4g0887 352 PANTHER METHYLTRANSFERASE 28 351 - -
Gso4g0887 352 Gene3D Vaccinia Virus protein VP39 139 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0887 Gso-Chr4 9574173 9577865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0887 - - gmx:100819297 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0887 4 9574173 9577865 Gso4g0887 4 9574173 9577865 ECH
Gso4g0887 4 9574173 9577865 Gso6g0876 6 8341906 8347018 GST