Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0870 ATGAGGATGAGGGTTTGGGGATCCGAGATCGTGTTCGCCCTATTGCTATGTGGGACCCTCTCATGCACTGCTCAAGCTATTCATAATAGGGTTTCTCTCTCCACCACCACCACCACCATCTGTCCTGCTCGTTCCCTCCTCGATTTCATCTTAGGGTTTCCAGATTCCACCTGCCCTCTTCCCAATTCTCTTGGATCCATTGCCGTCACCGAGGGAGATGAGGTTTCTTTGCAGAAGGCGCTGAATATGGTTCACAAGAATAATCATGAATATGTGGCTGTGCTCTTCTATGCGTCCTGGTGCCCTTTCTCTCGGGTGTTTAGATCAGTTTTCTCTGTTCTCTCTGCGCTACACCCTTCCATTCCTCATTTTGCCATTGAAGAATCATTGGTTAGGCCAAGCATACTGTCCAAATATGGTGTCCATGGTTTCCCTACACTGTTCATTTTGAATTCTACGATGCGGGTTCGGTATCATGGGTCCCGGACCCTTGGCTCACTCATTGGTTTCTACAATGATGTTACTGGGATTATGATTGATTCACTTGATCAGCTATCACTTGAGAAAATTGGTCGTTCATCTGCCGATGAGAGTCATGGTAACACCGAGCCAGAAAGTTGTCCATTTTCATGGGCTAGATCTCCAGAAAACTTACTACGTCAGGAAACTTATTTGGCTCTGGCCACTACATTTGTGGTTTTGAGATTACTATACTTGTTTTTCCCTACGCTGCTTATATGTATTCAATATACTTGGAGAAGGGTCATCCAAAATATTAGAATATGGAGCTTGCTTGAACATCCTTTGGTTTATTTGAAGCGCCTAACACAGTCATTTAACTGTTTGAAAGAGCCATGCAAGAGACGTAATCTGCAGGAAGGAGCAATGAATGCTAGAGCATGGGCTTCCAAGTCCCTTGCCACCGTTTCAATTGGAGAGGAAAGCAGCAGCCGTGGGATGCATCTGTGA 969 0.4541 MRMRVWGSEIVFALLLCGTLSCTAQAIHNRVSLSTTTTTICPARSLLDFILGFPDSTCPLPNSLGSIAVTEGDEVSLQKALNMVHKNNHEYVAVLFYASWCPFSRVFRSVFSVLSALHPSIPHFAIEESLVRPSILSKYGVHGFPTLFILNSTMRVRYHGSRTLGSLIGFYNDVTGIMIDSLDQLSLEKIGRSSADESHGNTEPESCPFSWARSPENLLRQETYLALATTFVVLRLLYLFFPTLLICIQYTWRRVIQNIRIWSLLEHPLVYLKRLTQSFNCLKEPCKRRNLQEGAMNARAWASKSLATVSIGEESSSRGMHL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0870 322 SUPERFAMILY Thioredoxin-like 87 176 IPR036249 -
Gso4g0870 322 CDD PDI_a_ERp44_like 72 171 - -
Gso4g0870 322 ProSiteProfiles Thioredoxin domain profile. 47 195 IPR013766 -
Gso4g0870 322 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 320 - -
Gso4g0870 322 Pfam Thioredoxin 86 169 IPR013766 -
Gso4g0870 322 Gene3D Glutaredoxin 68 178 - -
Gso4g0870 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Gso4g0870 322 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 1 320 IPR044606 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0870 Gso-Chr4 9335581 9339117 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0870 - - gmx:100815032 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0870 4 9335581 9339117 Gso4g0870 4 9335581 9339117 ECH
Gso4g0870 4 9335581 9339117 Gso6g0865 6 8229308 8232920 GST