Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0869 ATGGCGACGCCGGAACCGCAACTGGAACCCACTTCTGACCACCGCGTCGACTCTCTTCCGCTCGTCGACCTCCGCCTCCTCTCTCAACCCGAACTCTACACCCTCTCCCTCTCCGGCGCCACTCACTGCCACCGCCGTAACAGCGACGACGACTCCGTGATTCCCAAAATCGACCGTTCCAATTTTAACGAATCCGCCGGCAGCCGCAAACAGACCTACTCCAAACTCCGCCTCAACAAGCGCAAACAAAATCCCGCGGTTCCCGCCTCCTCCTCCTTCCACATTCCCCTCCACATTTCGGAGCCCGAGGAGGAAGAAAACTCCCGAATTGTCGCTCTTCTGCAGCAACTCTTCGGCGTCGAGCCTCTCCGCAACGCCCCGCGCAACGATGCGGCGGAGCGCCGCCTCGTTCCCGTCCAGGTCGACTTCAAACAGCCGCCTCCGATGTTCGCGGCGTTCCAGAACGTTCCAATTGACGTAGTCGCAGACGGCAGTCAGAGGAAGCGGAAGCGCGGGCGGCCGCGGAAGGACGAGAATTCGGTGACGGTTTTCGTCGAGGAACCGAAGAAGGTTACCAAGGAGGAGAATTCTGTGACGGTTTTCGTTGAGGAACCGAAGAAGGTTAACGGTAACGGCGAGGTGAACGCGGCGGTGGCAACAACGACGACGACTGTTGGTTTGGATGAGGATCCGTTTGAGGTGGTGTTGAAGAGGAGGACACAAGGATTGGAGACGGAGCCACAAGTGGTGGAATTTTTGGAGACTTTGAATGGAGAATGGGCGAGTCAGAGGAAGAAGAGGAGGATTGTGCCGGCCAGTGAACTTGGTGACTTGTTGCCTGCGGGATGGAAGATAGTGATTATTACTATGAGGAGGGCAGGTCGTGCTTCCGCTGTTTGTCGCCGTTACGTAAGTCCTGATGGACACCAGTTTGAGTCGTGCAAAAAAGCTTCTGCATACTTGCTTTCTGTTTTTGGTGTTCAAGATAGAAGCCATTTAAAATCTAGTTATTCTGATGGTGCTCAGCAATTGTCCAGTAGTATGAACAGGGCATCTGAAAGTAGTGTTGGTCATGTCCCTACTGGAGACATGAAGACTGATGCCAGTGCAAGTTATTTGCCCTCAGCTGGTGCACCTATACACTCTAGTCATGACAAGCAGCCCCCCATATCATCATCAATTGGGAGTGAAAATTTCAATAGTGATCTGGCTTTGGGATGTAAATTAGGAGATGCTACTGGTGGAGCCTTTAGAGACTTTGACTTTCAAACTGAAGATAAAAAACTATCGAAGGCTGATAAGGATGATGGAAATTCAGTTCAGGAATGTTTTGTGGAGGATAGAGTTTGTAATGTACAGAGTGAGAAGTTGGTTGGTGCTGTCGAGTCTAGTGATGCTGCATGCAATCTTTATATTCCTTTGGTTTTCTCTACTCCTTTCTCCAATAATAATAGTGACAATGGTCAATTTTTAGATGAAATAAATGCTTCCAGATGCATGAAGGGTGGCATTAGTAATTTTGCTAGTCACGATAGAGATACTGGATGCTGTGAAACTGTTTCTTGTGGAAATGAGCAAGCACATGTTGACAACAATGGACTTGGGCTTTCTGTGAAATTAGTGGAAGAGAACATTCAGAAACTAAGTTTTGAAAGCAGCATGCTGGCTCCAAATTCTGAGGGGAAAATACATGCTGGTAAAAATTTAGAGGATGGACATCTTATCAGTTCACTGGAAGATATGGAGATTAGAGATGGAAAGGCCATTATGAATGACAAACAACAAATTATTTGTAGCAGAGACCAGACTGAAATTAAAGATGTTTCTACTGATGTTAAACTGCATAGTAGTTCTGAGGGTTGTTCACTCGTCTCATCTCATCATGAACTTAATACATCTACAAGTAATATGGACAGGACACAGACTTCCGAGCTGAAGGACTCTGCTGAGGAAAATATTTTTGATAGTGATTTATTTAGCTCATCTATTGATGAAAGAACACGTGTTCACAGTGGCTACATTAGTAATGTTTCTTTTAGCTCTTGCACACAAGATGCATCCGAGTATGGTGGATTTGATTTTGCTTCTGATCTTAAATTAGATAAGGATGTTAGTGATAATCATATTCTTTCAAATGAGGAGGCTGTGACAAGGTGTTTACGGGAAAGGAGTTCCTTGAATGACCAAAATAGCATGATGGACAATCTGTTGCACAGAAGTTCTGAAAGTAACTTATTTGCTCTAACTGGTAATCAGCACTCTTGTGCGTTTCATGATAATGTAAATATCTCTGATGGAACCTTTGATGCACTCAAAGTTGTTGATGCTGGTTGCATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGCTGTTGATGCATATACTACTGCTAGCATTATGCAGGGAAAACCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAGAAGCCAAGTGATGATGGTGTTAATAAAGCAAATAAATCCTGCTTACCAGAGACCGCTCAGAATGAAGTTGAAATGTTCCAAACTGACTCTATGGGTCTGCCCAAATTTCGGTAG 2580 0.4562 MATPEPQLEPTSDHRVDSLPLVDLRLLSQPELYTLSLSGATHCHRRNSDDDSVIPKIDRSNFNESAGSRKQTYSKLRLNKRKQNPAVPASSSFHIPLHISEPEEEENSRIVALLQQLFGVEPLRNAPRNDAAERRLVPVQVDFKQPPPMFAAFQNVPIDVVADGSQRKRKRGRPRKDENSVTVFVEEPKKVTKEENSVTVFVEEPKKVNGNGEVNAAVATTTTTVGLDEDPFEVVLKRRTQGLETEPQVVEFLETLNGEWASQRKKRRIVPASELGDLLPAGWKIVIITMRRAGRASAVCRRYVSPDGHQFESCKKASAYLLSVFGVQDRSHLKSSYSDGAQQLSSSMNRASESSVGHVPTGDMKTDASASYLPSAGAPIHSSHDKQPPISSSIGSENFNSDLALGCKLGDATGGAFRDFDFQTEDKKLSKADKDDGNSVQECFVEDRVCNVQSEKLVGAVESSDAACNLYIPLVFSTPFSNNNSDNGQFLDEINASRCMKGGISNFASHDRDTGCCETVSCGNEQAHVDNNGLGLSVKLVEENIQKLSFESSMLAPNSEGKIHAGKNLEDGHLISSLEDMEIRDGKAIMNDKQQIICSRDQTEIKDVSTDVKLHSSSEGCSLVSSHHELNTSTSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTRVHSGYISNVSFSSCTQDASEYGGFDFASDLKLDKDVSDNHILSNEEAVTRCLRERSSLNDQNSMMDNLLHRSSESNLFALTGNQHSCAFHDNVNISDGTFDALKVVDAGCMEPQLGIVSCSNIAVDAYTTASIMQGKPQGCVSVPLGGSILNFEKPSDDGVNKANKSCLPETAQNEVEMFQTDSMGLPKFR* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0869 859 MobiDBLite consensus disorder prediction 338 395 - -
Gso4g0869 859 MobiDBLite consensus disorder prediction 43 57 - -
Gso4g0869 859 MobiDBLite consensus disorder prediction 338 356 - -
Gso4g0869 859 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 790 - -
Gso4g0869 859 MobiDBLite consensus disorder prediction 43 71 - -
Gso4g0869 859 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 790 IPR037472 -
Gso4g0869 859 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 269 342 IPR001739 GO:0003677
Gso4g0869 859 SUPERFAMILY DNA-binding domain 275 324 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0869 Gso-Chr4 9320043 9328065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0869 - - gmx:100780637 1671.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0869 4 9320043 9328065 Gso4g0869 4 9320043 9328065 ECH
Gso4g0869 4 9320043 9328065 Gso6g0864 6 8217409 8225130 GST