Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0866 ATGGCTTGGCGCTTCTTCTCCTTCCTTTCTAAAACCCTAAACCCTAACCGCAACCCCTCTTCCTCCACAGCCCCGTTCTCCACCTCCTTCCTCGTCACCAAAACCCCCAAAAAATTCAAGAAAAAACGCAAACCCAAACCCAGCCCGAGAACCACCCCGGTCCAGACCGAACCGAACCGCATCCCCCAATTCGAGCGCATTCTCCACCGCGACGCCCTCCTCCGCTTCGTGACCCGCTCGAAGCAGTTCCTCTCCGCCCAGCCGGAGCACGTCCTCCGCCTCGACGACGCCGGCAAGCTCCACCGCGAGCTCGGGTTCCCGCGCGGCCGCAAGGTCTCCCGCTTCCTCCTGCGCCACCCGCTCCTCTTCCAGACCTACCGCCACTCCGACGGCAAAACATGGCTAGGGTTCACCGACCTTATGGAGGACCTCCTCGCAGAGGAACGCTCCCTCATGGACCAATTGGAACTCGACCGCGTCGAGAAGGTTCGGAAGCTCCTCATGATGTCCGCGCGCAACCGCATCCCCCTCAGCAAGATCCACCACTGTAGAACCCTATTTGGCATCCCCGACGATTTCCGCGATAGGGTTTCCAAATACCCTAATTTTTTCAATATTGTGGTTGAAAACGACGGGAGGAGGGTGCTGGAGTTGGTTAACTGGGACCCACTTCTGGCAGTGAGTGCCTTAGAGAAAGAGTTCGTTGTTGACGAGGATTCCGCGAAGAGGAAGTTTAGGTTTCCGGTGAAGTATGGGAAGGATTTGGATTTGGAATTGGATGATAGTAGGAAGCTTAATTTGCTCAACGCGCTTCCTTTGGTGTCTCCGTATTCGGATGGGTGTAAGATCGATGTGTGGACGTTGGAGGCGGAGAAGTATAGGGTTGGGGTGATTCATGAGTTCTTGAGCTTGACGTTGGAGAAGAGGGCGTCGATTCATCACCTTGTGGTGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCAGATGCTGCGGAAGCAGCCGCGGGCGTTTTACTTGGCCGGAACCGAGATGAATTGGGGTGTGTTCTTGAAGGATTCGTATGATGGAAATGGGGTTTTGATTGAGAAGGACCCACAGGTGGTGTTTAATGAGAAGCTTTATAAGTATGCTCAGGTGGACCAAATGGAACCCGGGTGTGATGATGGGGTGGAAGAGCCACATTTGAGTTAA 1197 0.5388 MAWRFFSFLSKTLNPNRNPSSSTAPFSTSFLVTKTPKKFKKKRKPKPSPRTTPVQTEPNRIPQFERILHRDALLRFVTRSKQFLSAQPEHVLRLDDAGKLHRELGFPRGRKVSRFLLRHPLLFQTYRHSDGKTWLGFTDLMEDLLAEERSLMDQLELDRVEKVRKLLMMSARNRIPLSKIHHCRTLFGIPDDFRDRVSKYPNFFNIVVENDGRRVLELVNWDPLLAVSALEKEFVVDEDSAKRKFRFPVKYGKDLDLELDDSRKLNLLNALPLVSPYSDGCKIDVWTLEAEKYRVGVIHEFLSLTLEKRASIHHLVVFKEEFSLTKHTYQMLRKQPRAFYLAGTEMNWGVFLKDSYDGNGVLIEKDPQVVFNEKLYKYAQVDQMEPGCDDGVEEPHLS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0866 398 Pfam Plant organelle RNA recognition domain 60 381 IPR021099 GO:0003723
Gso4g0866 398 MobiDBLite consensus disorder prediction 35 59 - -
Gso4g0866 398 PANTHER OS09G0473400 PROTEIN 1 388 - -
Gso4g0866 398 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 388 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0866 Gso-Chr4 9290594 9292395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0866 - - gmx:100813429 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0866 4 9290594 9292395 Gso4g0866 4 9290594 9292395 ECH
Gso4g0866 4 9290594 9292395 Gso6g0861 6 8196843 8198652 GST