Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0829 ATGGGAAATATTCTGAATGAAGAAGAGCATGAGCATCCTCTGATAAAGTCAACACTGCCACCACAACCACACGGATCCAACAATCACTCTCTCTTCCAACGATCATGTTCCGAATCCAAGAAGCTATGGCACATCGCTGCCCCCTCCATCTTCACCCGCCTCGCCATGTTCTCCATCACCGTCGTCACCCAGTCCTTAGCCGGCCACCTCGGCGATCTCGACCTCGCCGCCATTTCCATCGCCTGCACCGTCCTCATCTCCATCACCTTCGGTTTCTTGTTGGGTATGGCGAGTGCGCTTGAGACACTATGCGGGCAGGCGTACGGCGCCGGACAACAGCGCATATTGGGCGTTTATTTGCAACGCTCGTGGGTTGTTCTGTTCCTGTCTTCCATTCTGTTGTTGCCGGTGTTCATTTTTGCGACGCCGGTGTTGAAGCTAATAGGGCAGCCCGTCGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGGTTTGGTTGATCCCATTGCACCTGAGCTTCCCGTTCCAGTTCACTTTGCAGCGGTTCCTGCAGTGCCAGTTGAAGACCGGCATCATTGCTTGGGTTTCAGGGGTGGCTCTTGCGGTTCACGTGTTAGTGAGTTGGGTTTTTGTTTATAGGATGAGAATTGGGATTGTTGGCACTGCTCTTTCCATTGGTTTCTCGTGGTGGCTCTCTGTTTTGGGAATGCTCGGGTATACACTCTTTGGTGGTTGCCCTCGCTCGTGGACTGGTTTTTCTGTTGAAGCTTTTGTTGGCCTTTGGGAATTCTTCAAACTTTCTTTGGCTTCTGGGGTCATGCTTGCGTTAGAGAATTTCTATTACAGACTGTTGCTTATAGTTTCTGGATATATGCATAACACTGAGATTGCAATTGATGCTCTTTCCGTTTGTGTGACTATTTATGGTTGGGAGTCCATGATACCACTAGCATTTTTGGGCGCAACCGGGGTGCGTGTAGCAAATGAGCTTGGTGCAGGCAATGCAAAAGGTGCAAGATTTGCAACTGTGGTTTCTGTGGTAACTACTTTATTTGTGGGATTTATATTTTGGTTGGTAATTGTGTCCTTCAACAAGAATCTTGCCTTGATCTTTACATCGAGCTCTTCCGTTATCCAAATGGTCAATGAGCTGGCAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCAGGGGTGGCAGTTGGGTCTGGTCGTCAAGCAGTAGTGGCTTATATAAACATTGGCAGTTACTACTTGATTGGAATACCTCTTGGGGTTCTCCTCGGCTGGTTGCTTCCTTCGGGTATTGGTATGTGGACTGGAATGATGAGTGGAACAGTGGTTCAAACATTGATCTTGGCTATTATTACGATGAGATATGATTGGGAAAAAGAGGTACAGAAAGCCCAAATTCTTGTTGAAGAGGAAGCAACATTCAACGACCAATAA 1461 0.4805 MGNILNEEEHEHPLIKSTLPPQPHGSNNHSLFQRSCSESKKLWHIAAPSIFTRLAMFSITVVTQSLAGHLGDLDLAAISIACTVLISITFGFLLGMASALETLCGQAYGAGQQRILGVYLQRSWVVLFLSSILLLPVFIFATPVLKLIGQPVAVAEQAGLVAVWLIPLHLSFPFQFTLQRFLQCQLKTGIIAWVSGVALAVHVLVSWVFVYRMRIGIVGTALSIGFSWWLSVLGMLGYTLFGGCPRSWTGFSVEAFVGLWEFFKLSLASGVMLALENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLGATGVRVANELGAGNAKGARFATVVSVVTTLFVGFIFWLVIVSFNKNLALIFTSSSSVIQMVNELAMLLAFTVLLNCIQPVLSGVAVGSGRQAVVAYINIGSYYLIGIPLGVLLGWLLPSGIGMWTGMMSGTVVQTLILAIITMRYDWEKEVQKAQILVEEEATFNDQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0829 486 TIGRFAM matE: MATE efflux family protein 48 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso4g0829 486 CDD MATE_eukaryotic 38 472 IPR045069 GO:0042910|GO:1990961
Gso4g0829 486 PANTHER PROTEIN DETOXIFICATION 22 474 - -
Gso4g0829 486 MobiDBLite consensus disorder prediction 8 30 - -
Gso4g0829 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 474 - -
Gso4g0829 486 Pfam MatE 270 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso4g0829 486 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0829 Gso-Chr4 8777096 8782022 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0829 K03327 - gmx:100814869 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0829 4 8777096 8782022 Gso4g0829 4 8777096 8782022 ECH