Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0828 ATGGCCGAAGGAAGAAACGAAGACAAAGACAGAACCATGAAGCGCCTTCTTCTCATAACAAACTGTCTCTTACTCACCATCGGCACCTCCGGTGGGCCCCTCGTGATGCGTCTCTACTTCCTTCACGGCGGCCACCGCGTCTGGCTCTCCAGCTTCCTCGAAACCGCCGGCTTCCCCCTCATGCTCCTACCCCTCGCCGTATCGTACTTCCGTCGCCGCCGCACCGCCGCCGCCGGAACCTCCAAACCGAAATTAATCTCTATGAAGCCCCCTCTCCTCGCCGCCTCCGCCTTCATCGGAATCCTCACCGGCCTCGACGACTACCTTTACGCCTACGGCGTGGCGAGGCTTCCGGTCTCCACTTCCGCCCTCATCATCGCAACGCAACTCGGCTTCACCGCGTTCTTCGCGTTCCTTCTCGTGAGGCAGAAGTTCACGGCGTACTCCGTAAACGCCGTCGTTTTGCTCACTGTTGGCGCCGGCGTTTTGGCGCTTCACACCAGCGGAGACCGTCCCCCTGGCGAGTCCGTTAAGGAATATGTTATGGGCTTTGTGATGACAGTGATCGCTGCGGCATTGTATGGATTCATTTTACCCTTGGTGGAGTTGGTGTACAAAAAAATCAAACAGCCTCTTACTTACTCTCTTGTCATGGAGATTCAGTTCGTTATGTGCTTCTCCGCCACTCTCTTTTGCCTCCTTGGAATGATCATCAACAATGACTTTAAGGTGATTCCGAGGGAAGCCAAAAAATTTGAGCACGGAGAAGGAAGTTACTATGCTGTTTTGGTGGGGAGTGCAATATTATGGCAGGCTTTTTTCTTGGGGGCGATTGGGGTTATATTTTGTGCCTCGTCTTTGTTTTCTGGTATTTTGATTGCGGTGTTGCTACCCGTAACGGAAGTGTTGGCGGTTATTTTCTACAAAGAAAAGTTTCAAGCCGAAAAAGGGGTTTCTCTGTTGCTCTCGCTTTGGGGCATGGTGTCCTACTTCTATGGGGAGATTAAACACTCAAAGAAAATGAAGATGAAGAACAGTGATACTGAAGCAGAACTGGCACAACAGTATTCGTGA 1074 0.5168 MAEGRNEDKDRTMKRLLLITNCLLLTIGTSGGPLVMRLYFLHGGHRVWLSSFLETAGFPLMLLPLAVSYFRRRRTAAAGTSKPKLISMKPPLLAASAFIGILTGLDDYLYAYGVARLPVSTSALIIATQLGFTAFFAFLLVRQKFTAYSVNAVVLLTVGAGVLALHTSGDRPPGESVKEYVMGFVMTVIAAALYGFILPLVELVYKKIKQPLTYSLVMEIQFVMCFSATLFCLLGMIINNDFKVIPREAKKFEHGEGSYYAVLVGSAILWQAFFLGAIGVIFCASSLFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLLLSLWGMVSYFYGEIKHSKKMKMKNSDTEAELAQQYS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0828 357 PANTHER OS09G0467300 PROTEIN-RELATED 7 351 IPR030182 GO:0015211|GO:0016021
Gso4g0828 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 167 - -
Gso4g0828 357 Pfam Purine nucleobase transmembrane transport 17 340 - -
Gso4g0828 357 PANTHER PURINE PERMEASE 2 7 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0828 Gso-Chr4 8763887 8765641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0828 13 352 Organic Solute Cotransporters AT1G28230 64.265 3.24e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0828 - - gmx:100803818 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0828 4 8763887 8765641 Gso4g0828 4 8763887 8765641 ECH
Gso4g0828 4 8763887 8765641 Gso6g0834 6 7935846 7937865 GST
Gso2g1797 2 41751772 41753811 Gso4g0828 4 8763887 8765641 PCT
Gso4g0828 4 8763887 8765641 Gso14g0231 14 2009169 2010625 PCT
Gso4g0828 4 8763887 8765641 Gso2g2442 2 48961318 48962758 PCT