Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso4g0723 | ATGGAAGACGCCGGCGGGAAGATTGTGAAGTCCGGCCAGGTGTCGCGTAAGGTGGTTGACGTGGCTGCGGGGGAAGCACACACTCTCCTTCTTACTGGGGATGGCAGTGTTTACTGTTGGGGCAAGGGAATGTTTGGACGGCTCGGGACTGGGGCAGAAAAGGACGAGCTTTTACCAGTACAACTCAACTTTGGATACCCAAATCCAAACGGAACAGAAGGCACTTTCAAAATAGTGGGAATTGCTGCCGGTGCTTATCACAGTCTTGCTCTAGCAGAAGACGGAGCTGTTTGGTGTTGGGGTTACAATTTCTATGGTCAACTTGGTATAAATGGAGAGGAATCACATGACAATGAATATGCTGTTGGAGACAATTCTCTAGTGCCCCGCATACTGAACAAGTTTCTTGAATTGCATCCCCCTGATTCTTCTTCATCGGGTGTGTCTGAAGCAGAAAGTAAAACACCACTTAAGATATGTGCTGTCAAAGCTGGAGGAATGATGTCTCTAGCTATTGATAACCATGGGACCCTGTGGATGTGGGGAAACTGCCCACGACAAAGCAAAGAAGGTGGGTTAGCACTTGTAAGCAGTTTCACTCCAACTCCAGTTTGGGATTTTCAGGGCCACACTGTTGTCAAGGTTGCATGTGGAAATGAGCATGTTGTAGCTCTGGTTAGTGCTGGAGAGACATACAATGGTGAAGATCTAGTGTGCTACTCTTGGGGTTATAACAGCCGTGGCCAATTAGGCTTGGGGGATCGAGAGAGCAGACTGCATCCGGAAGTTGTTAGAACATTTGACGAGGAGTCCCCTTATGAGGTAGCATGTGGTGCCTTTCACACTGCTTTGCTCACTCGTAAAAAGAAACCTAGTGACACAGTAGAAAGCACATGCTGGACCTTTGGCCTTGGGGATAATGGCCAGCTTGGGCATGGAACTACACAAAGCACATTATTTCCTACACCTGTTAAAGAATTGCCACAAAATGTATCACTTATCTGTGTTGACTGTGGTTTGTTTCATACTAGTGTTGTTTCCTCAGATGGGGATGTGTGGTCATGGGGAATGGAGAAGGGCCTTGGCTTATGCCCTGATGCTAGTCGTGCTGGAACAGATTCGGGCGATGCCCTCTCTCCCCGTCTCATGTCATGCCAGCCCCATCAACTTAAATTTCCAGATCCAGTTAAAGTTGCATGTGGGGCCGCACATACTGTTATTGTTGCACGAAAGGGATATAGAATGTGGTCTTGGGGTAGGGGAAGGAGTGGAGTTCTTGGAGATGGTAAAGGGTTTGATTGTTACACTCCTACAGCTGTGCTATGGCCTTCTACAATGGAGGATTCTGAGGAAGAGGAAGTAAAAAGCTCCGGTGAGCAAGATAAGGCTAGAGAAAAGGAGACTGGATTGACAACAGAAACAGAAGAGAAATTATCTTCAGCATTGAATGAGCTGAAGCTGCTTCAAACAAAGCTATCTATAATGGAAAAATATGCTAGTATACTTCATGGTTCTATTTTTGGAAAACCTTTTGATGAACAAGATATCCCTGTTTCATTGCGGAATTCAGGTTCATTTGACATTGCAAAAGAATGGGAGAGTATGTTGGAGGCAGCAGATCAAAGGAAGCTGATTAGGTTGGAAATGTTTTACCGTGACATGCTTACTGGAGTGAAAGATGAACTAATGAAGAGAAGGATCAAGGAAATTGTACAAGAGTGTCTCCAATCTTCAGAGGTGAAAAAATAG | 1749 | 0.4557 | MEDAGGKIVKSGQVSRKVVDVAAGEAHTLLLTGDGSVYCWGKGMFGRLGTGAEKDELLPVQLNFGYPNPNGTEGTFKIVGIAAGAYHSLALAEDGAVWCWGYNFYGQLGINGEESHDNEYAVGDNSLVPRILNKFLELHPPDSSSSGVSEAESKTPLKICAVKAGGMMSLAIDNHGTLWMWGNCPRQSKEGGLALVSSFTPTPVWDFQGHTVVKVACGNEHVVALVSAGETYNGEDLVCYSWGYNSRGQLGLGDRESRLHPEVVRTFDEESPYEVACGAFHTALLTRKKKPSDTVESTCWTFGLGDNGQLGHGTTQSTLFPTPVKELPQNVSLICVDCGLFHTSVVSSDGDVWSWGMEKGLGLCPDASRAGTDSGDALSPRLMSCQPHQLKFPDPVKVACGAAHTVIVARKGYRMWSWGRGRSGVLGDGKGFDCYTPTAVLWPSTMEDSEEEEVKSSGEQDKAREKETGLTTETEEKLSSALNELKLLQTKLSIMEKYASILHGSIFGKPFDEQDIPVSLRNSGSFDIAKEWESMLEAADQRKLIRLEMFYRDMLTGVKDELMKRRIKEIVQECLQSSEVKK* | 583 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 297 | 349 | IPR000408 | - | |
| Gso4g0723 | 582 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 81 | 91 | IPR000408 | - | |
| Gso4g0723 | 582 | PRINTS | Chromosome condensation regulator RCC1 signature | 36 | 52 | IPR000408 | - | |
| Gso4g0723 | 582 | PRINTS | Chromosome condensation regulator RCC1 signature | 97 | 113 | IPR000408 | - | |
| Gso4g0723 | 582 | PRINTS | Chromosome condensation regulator RCC1 signature | 215 | 231 | IPR000408 | - | |
| Gso4g0723 | 582 | PRINTS | Chromosome condensation regulator RCC1 signature | 339 | 357 | IPR000408 | - | |
| Gso4g0723 | 582 | PRINTS | Chromosome condensation regulator RCC1 signature | 408 | 429 | IPR000408 | - | |
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 176 | 228 | IPR000408 | - | |
| Gso4g0723 | 582 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 275 | 285 | IPR000408 | - | |
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 95 | 175 | IPR000408 | - | |
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 350 | 411 | IPR000408 | - | |
| Gso4g0723 | 582 | MobiDBLite | consensus disorder prediction | 445 | 473 | - | - | |
| Gso4g0723 | 582 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HERC2-LIKE PROTEIN | 6 | 582 | - | - | |
| Gso4g0723 | 582 | SUPERFAMILY | RCC1/BLIP-II | 14 | 440 | IPR009091 | - | |
| Gso4g0723 | 582 | MobiDBLite | consensus disorder prediction | 448 | 473 | - | - | |
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 35 | 94 | IPR000408 | - | |
| Gso4g0723 | 582 | Gene3D | - | 6 | 235 | IPR009091 | - | |
| Gso4g0723 | 582 | Gene3D | - | 236 | 485 | IPR009091 | - | |
| Gso4g0723 | 582 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 237 | 288 | IPR000408 | - | |
| Gso4g0723 | 582 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 6 | 582 | - | - | |
| Gso4g0723 | 582 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 299 | 345 | IPR000408 | - | |
| Gso4g0723 | 582 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 349 | 407 | IPR000408 | - | |
| Gso4g0723 | 582 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 34 | 91 | IPR000408 | - | |
| Gso4g0723 | 582 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 240 | 285 | IPR000408 | - | |
| Gso4g0723 | 582 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 94 | 172 | IPR000408 | - | |
| Gso4g0723 | 582 | Coils | Coil | 471 | 491 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso4g0723 | Gso-Chr4 | 7106808 | 7109907 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso4g0723 | - | - | gmx:100815199 | 1170.22 |