Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0707 ATGAGCCCAAGCGCCTCTAACTCTATATGCTCAGTTCATCAGCTGGAGAACATAGATGAGAATGCTCCTGCAGATTGGCCTGCATCATCCTGTCCCCCTCCTGATACTCCAACTGAATCTATGGAGTTCCTTGCGAGATCATGGAGTCTTTCAGCCATGGAACTCTCCAAAGCACTGCACAGCACCAACGTTACAATCTCCACCGGTATAGAGATGCCACTTTCGTGCCCTTCAGGCCACCAATTTGATACCAAGAGTTCCACTGCTTCCAAAGCTTTATCTAACGGGTGTTTCCCTCCATTTTTGCCAAAAGACAGTAATGAAAAGAAGGATTTACTTTTACTCCACCAAGCACTCAATCCAGAATTCCTTTCCAGTCAAAACTTGCTCAGAAATGGGGTATCTTGCAATCAACCTCATGATTATCTTCATCAGAGCTTGCTAAGAGGTAGGACAATGGGTAGGTGGTTGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGAACCCATAATGCTCATTTACACGCTGCAGTATCTGTGGCTGGTGTTGCTGCTGCTATTGCTGCAGTTGCAGCTTCAACAGCATCACCTGAAATGCCTTATGCAAACCAAAAGAACCCTCCCCCAGCTTCTTCTGCAATTGCATCTGCAGCAGCTTTAGTAGCCTCACACTGCATTGAGATTGCAGAAGATATGGGAGCTGAGCATGACCAAATATTAACAGTAGTCAACTCTGCCATTAATGCAAAAACCAATGGAGATATTATGACTTTAACAGCCGGAGCAGCCACAGCCTTGCGAGGAGCGGCTACTCTAAAGGCAAGGCTGCAGAAGGGGCCTGGAGCTACTTCAATTCCTCTAGTTGAGGAAAAGTGTGATGAAAGGAAAGAAGCAAACATCTTGACAGCACTGGATTATGTCTTTAGAGGTGGAGAACTTCTCAAACGTACAAGAAAAGGAGCTCTTCACTGGAAGCAAGTGTCTTTCAATATAAATTCAAATTTGCAGGTTGTAGTCAAAATGAAAAGCAAGCATATGGCAGGAACATTCACGAAAAAGAAGAAATATATAGTCACTGGAGTTTGCAATGATATCCCAGCTTGGCCCGGAAGGGAGAAGGAAGACATCAGTGAAAAGAGGGCATATTTTGGAATAAAAACAACAGACAGGACAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGGATCCAGTATATGTTGAATTGCCGTGTCAAAGTAACATTATAA 1269 0.4358 MSPSASNSICSVHQLENIDENAPADWPASSCPPPDTPTESMEFLARSWSLSAMELSKALHSTNVTISTGIEMPLSCPSGHQFDTKSSTASKALSNGCFPPFLPKDSNEKKDLLLLHQALNPEFLSSQNLLRNGVSCNQPHDYLHQSLLRGRTMGRWLKDQKERKKQEIRTHNAHLHAAVSVAGVAAAIAAVAASTASPEMPYANQKNPPPASSAIASAAALVASHCIEIAEDMGAEHDQILTVVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGPGATSIPLVEEKCDERKEANILTALDYVFRGGELLKRTRKGALHWKQVSFNINSNLQVVVKMKSKHMAGTFTKKKKYIVTGVCNDIPAWPGREKEDISEKRAYFGIKTTDRTIEFECGSKGDKQFWLEGIQYMLNCRVKVTL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0707 422 PANTHER EXPRESSED PROTEIN 12 419 IPR040269 -
Gso4g0707 422 ProSiteProfiles PH domain profile. 307 415 IPR001849 -
Gso4g0707 422 Gene3D - 289 420 IPR011993 -
Gso4g0707 422 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 12 419 - -
Gso4g0707 422 SUPERFAMILY PH domain-like 297 413 - -
Gso4g0707 422 Pfam Auxin canalisation 34 283 IPR008546 -
Gso4g0707 422 Pfam Plant pleckstrin homology-like region 313 416 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0707 Gso-Chr4 6952586 6956808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0707 - - gmx:100814154 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0707 4 6952586 6956808 Gso6g0710 6 6543544 6547464 GST