Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0690 ATGGCTTCTCACGACGGCATCTCCGCTGCTTCTTCAGATTCCGTCTTCAATCACCTCGTTCGTGCTCCCGAAGATCCTATCCTCGGGGTAACTGTTGCTTATAACAAAGATCCAAGTCCAGTTAAGCTCAACTTGGGAGTTGGTGCTTACCGAACTGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTGAGGCGAGTTGAGCAGCAACTCATAAATGACGTGTCACGCAACAAGGAATATATTCCGATTGTTGGGCTAGCTGATTTTAATAAATTGAGTGCTAAGCTCATTTTTGGGGCTGACAGCCCTGCTATTCAAGACAACAGGGTTACCACTGTTCAATGCTTGTCTGGAACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAACGGACTATATACTTGCCAACACCAACTTGGGGTAATCACCCAAAGGTTTTCAACTTAGCAGGGTTGTCTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTTGATTTTCAAGGACTTCTAGAAGATCTTGGTTCTGCTCCATCTGGATCTATTGTTTTGCTACATGCATGCGCACATAACCCCACTGGTGTGGATCCAACCCTTGAGCAATGGGAGCAGATTAGGCTGCTAATAAGATCAAAAGCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGCGGAAGTCTAGATGCAGATGCCCAGCCTGTTCGTTTGTTTGTTGCTGATGGGGGTGAATTGCTGGTGGCACAAAGCTATGCAAAGAATCTGGGTCTTTATGGGGAACGTGTTGGCGCCTTAAGCATTGTCTGCAAGTCAGCTGATGTTGCAAGCAGGGTCGAGAGCCAGCTGAAACTAGTGATTAGGCCCATGTACTCAAGTCCTCCTATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGACCGGGATTTGTTCAATGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATCATCAATATGCGCCAAGAACTTTTCGATGCTTTACGTTCCAGAGGCACACCTGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACTGGATTGAATGCGGAACAAGTTTCCTTCATGACTAAAGAGTACCATATATACATGACATCTGACGGGAGGATTAGCATGGCTGGTCTGAGTTCCAAAACTGTCCCACTTCTAGCGGATGCGATACATGCTGCTGTAGCTCGAGTTGCCTAA 1251 0.4572 MASHDGISAASSDSVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLINDVSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQDNRVTTVQCLSGTGSLRVGGEFLAKHYHQRTIYLPTPTWGNHPKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEQIRLLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNLGLYGERVGALSIVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLFNDWTIELKAMADRIINMRQELFDALRSRGTPGDWSHIIKQIGMFTFTGLNAEQVSFMTKEYHIYMTSDGRISMAGLSSKTVPLLADAIHAAVARVA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0690 416 CDD AAT_like 43 396 - -
Gso4g0690 416 PANTHER ASPARTATE AMINOTRANSFERASE 13 416 IPR000796 GO:0006520|GO:0008483
Gso4g0690 416 PRINTS Aspartate aminotransferase signature 190 209 IPR000796 GO:0006520|GO:0008483
Gso4g0690 416 PRINTS Aspartate aminotransferase signature 221 233 IPR000796 GO:0006520|GO:0008483
Gso4g0690 416 PRINTS Aspartate aminotransferase signature 289 314 IPR000796 GO:0006520|GO:0008483
Gso4g0690 416 PRINTS Aspartate aminotransferase signature 357 375 IPR000796 GO:0006520|GO:0008483
Gso4g0690 416 SUPERFAMILY PLP-dependent transferases 14 414 IPR015424 -
Gso4g0690 416 Pfam Aminotransferase class I and II 42 408 IPR004839 GO:0009058|GO:0030170
Gso4g0690 416 Gene3D - 75 316 IPR015421 GO:0003824
Gso4g0690 416 Gene3D Aspartate Aminotransferase, domain 1 21 408 IPR015422 GO:0003824
Gso4g0690 416 PANTHER ASPARTATE AMINOTRANSFERASE 13 416 - -
Gso4g0690 416 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 259 272 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0690 Gso-Chr4 6739742 6744413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0690 K14454 - gmx:100804162 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0690 4 6739742 6744413 Gso6g0691 6 6385885 6390675 GST