Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0656 ATGGCGCGAGTATGTGCGTCTCTTACATTCCCGCCCGCGCTCCGTTTCAAGATTCAGTGCCACTCTCACTCGTCCTTCGTTATCTTCCGAGTAAACTCCCTCTACTCTCAAATTTACGGTTACCGGGGAAAGGAACAATCGGTTACTGGCAGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAACCCATGAGTTGGTGTGATGGCGTTCTGGAACCACGGGTTCTCGTCGCACCCGATCCTGGTACTGATCGAAATGGTCTGGGACAGATGATATTGCTCCGCCATCCCAAATCTGGTAATGCAACACAATATCTGTTTGTAAATGGAATACTTCTAGAACTTCAGTGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGCTGTATTTATCCACACCAATTGATCCCGTTTTCATCATGTTGCCTATATTCAAGGAAGCTAGAATGAAGAAAGGGGATGATCTTGGGAGGTTCAGGCAATTGGATGAGATCTTGTTTGTTGATGGATATCCTGGATACATGCAGTTAATGTCTATTGTGGAGAACTGTATGCAAGTAGTTTCTGAAATCATAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGATTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAAATTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCAGTCTCTATATTAGGAGAGTATTTGAAGGAAGAGCCTTGGTTGCAGCTTTTGTGTAACCATCTTAAGTTAAATATACTTGAGGTTACTGGAAAAGCACAAGCAAATGCTGAAGGAAATAATAACTCACGTTTATGTAATGAATTACAGGAACAGAGTAATGATAAGAAGGGTACAACTGCAAAGAAAGGTAGACAAGCAAAGAAGGTAAAATTGGAGACAGAATCACACAACATCAAAGACATGTTTTCGAGGGCCTCCCGAAAGAAAAGTTAA 1017 0.412 MARVCASLTFPPALRFKIQCHSHSSFVIFRVNSLYSQIYGYRGKEQSVTGSVRAFESSSAKPMSWCDGVLEPRVLVAPDPGTDRNGLGQMILLRHPKSGNATQYLFVNGILLELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFKEARMKKGDDLGRFRQLDEILFVDGYPGYMQLMSIVENCMQVVSEIIEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEPWLQLLCNHLKLNILEVTGKAQANAEGNNNSRLCNELQEQSNDKKGTTAKKGRQAKKVKLETESHNIKDMFSRASRKKS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0656 338 MobiDBLite consensus disorder prediction 302 332 - -
Gso4g0656 338 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 146 233 IPR019024 -
Gso4g0656 338 PANTHER RIBONUCLEASE H2 SUBUNIT B 57 337 IPR040456 GO:0032299
Gso4g0656 338 MobiDBLite consensus disorder prediction 298 338 - -
Gso4g0656 338 Gene3D - 142 270 - -
Gso4g0656 338 Gene3D - 71 141 - -
Gso4g0656 338 Pfam Ydr279p protein triple barrel domain 90 143 IPR041195 -
Gso4g0656 338 CDD RNase_H2-B 74 227 IPR040456 GO:0032299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0656 Gso-Chr4 6434225 6438586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0656 K10744 - gmx:100792495 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0656 4 6434225 6438586 Gso6g0658 6 6100407 6104540 GST