Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0647 ATGACGTTGTTAGGTACTGCACTGTCTATCAGTGTGATTAGGGTTACACTTACCCATTTACGCGCGCCTTCTTTCTCCAACCGGGCGAGTCGACTCAGCTCCAACTCAATGAGTCAATCCGCCGCCACCGCCGACCCCAACGCTATTGCGACAACGAATGACGCGCCGTCGCAGCCTGAAAACGCGGATGTTGTGGTGCAGTACGTGGTGCTCCGGCGAGACCTGATCGACACTTGGCCGCTAGGGAGCGTGGTCACTCAAGGTTGTCACGCTTCTGTTTCGGCCGTTTGGTCCAACAAAGAAGATCCTTTCACCGTTGATTATTGCAGCCCCGATAAAATTGATTCCATGCACAAAGTTACACTTGAAGTAAAGGGAGAACCCCAGATCAAAAACTTGTCTGAGAAGCTTACAGCTGGTGGGATTATTCACAAACTGTGGATTGAACAACCTGAAAACATACCTACGTGCCTTGCCACAAAACCTTACCCCAAGTCAAGCGTTTCTTCGTATTTTAAGAAGTTGAAACTCTGTTATCCAAAAGAGCAGTTTCCCATGCATGTAAGTGCTGCATTCTCTAAGGTCTCTCAAAAATTGCAAATATCTCATTGA 612 0.4788 MTLLGTALSISVIRVTLTHLRAPSFSNRASRLSSNSMSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSSVSSYFKKLKLCYPKEQFPMHVSAAFSKVSQKLQISH* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0647 203 CDD PTH2_like 65 178 - -
Gso4g0647 203 Pfam Peptidyl-tRNA hydrolase PTH2 66 178 IPR002833 GO:0004045
Gso4g0647 203 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 25 178 IPR042237 -
Gso4g0647 203 MobiDBLite consensus disorder prediction 28 57 - -
Gso4g0647 203 Gene3D Bit1 65 184 IPR023476 -
Gso4g0647 203 SUPERFAMILY Peptidyl-tRNA hydrolase II 65 178 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0647 Gso-Chr4 6308352 6314005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0647 K05969 - gmx:100788281 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0647 4 6308352 6314005 Gso6g0648 6 6004014 6006680 GST