Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0634 ATGGCCATTCTCCACTGCACGTCACTGCCATTTCTTTCTCTGAGAACCACCATCAGTTCCTCCAAGTCCACGTTAACCTCAACGAGAATTCCGTTGTTCCTAGCGATGAACTCGTTCGCCAAATCAGAACCCGTGTCATCCTCAGCCTCTTCATCATCATCAACGTACCAGCAGGTGCCGGAGCAAGATGCTAATAACGACTTGGACCGCGTAGCAGACAACACGTTTCGCAGGTACACGTCCAACGTTACCAAGGGGAGTGGCAAAGGAACAGCCATTGTCTGGTTCAGGAACGATCTCAGAGTTTTGGATAACGAGGCTCTCTATAAGGCATGGCTTTCCTCCGAAACCGTGTTACCTGTCTATTGTGTTGATCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTGCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATTTGATGAAAAGAGGACTAAATTTGCTTGTACAACATGGGAAGCCTGAGGAAATCCTTCCTTCTCTTGCAAAATCTTTTCAAGCTCATACAGTGTATGCACAGAAAGAAACTTGCAGTGAGGAGCTGAATGTTGAAAGGTTAGTCATGAGAGGTCTTAAACAAGTTGTGACATCACCTGAGGAGTCCAGTGGTATCACAGTTTCAAACAACATCCCTAAGCTGCAACTAGTTTGGGGCACCACCATGTACCACCTTGATGACCTTCCTTTTGATGCTACTAGTTTGCCAGATGTGTATACTCAATTTCGTAAGCTTGTTGAAACCAAATGTACTATACGCTCATGCATCAAACTACCAGCATCTCTTGGACCACCTCCCACAGTTCAGGATTGGGGATGCCTTCCTTCATTAGAGCAGCTGGGACTTAGCTCACAGAGTGTTAACAAAGGGATGAAGTTTGTGGGGGGTGAAACTGCAGCATTGAGCAGAGTATATGAATACTTTTGGAAGAAGGACTTGCTGAGGGTATATAAAGAGACCAGGAATGGGATGTTGGGGCCTGATTATTCTACCAAATTCTCACCATGGCTTGCCTCAGGAAGTTTGTCTCCTCGTTTCATATATGAAGAGGTGAAGAGATATGAGAATGATAGACTAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTTTGTCAGTGAAATATGGGAATTCGCTTTTCCATTTAGGTGGTCCTAGGAAAGTTCAGCGCAACTGGAGCCAAGACAAGAATTTGTTTGAATCCTGGAGAGATGGTTGTACTGGGTATCCTCTGATAGATGCCAATATGAAAGAATTATCAACTACAGGATTTATGTCAAATCGAGGACGGCAGATTGTGTGTTCATTTCTTGTTCGTGATATGGGCATTGATTGGCGCATGGGAGCAGAATGGTTTGAGACATGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGATCAGGAGTTGGGAATGATCCCAGAGAAGATCGTTATTTCAGCATCCCAAAACAAGCACAAACGTATGACCCTGAAGGTGAGTATGTTGCATACTGGTTGCCGCAGTTGCGAAAAATCCCAAAGGAGAAAAGAAACTTTCCTGGAAATTTAATATACATTCCTCAAATTGTGCCTCTCAAGTTTGGAACAACTAGTGGACACAATAAGGACAAGTTCTTTGGTGCAAGAAGAACCAACGATAGAGGAAGTAAAAGAAGATAG 1755 0.4365 MAILHCTSLPFLSLRTTISSSKSTLTSTRIPLFLAMNSFAKSEPVSSSASSSSSTYQQVPEQDANNDLDRVADNTFRRYTSNVTKGSGKGTAIVWFRNDLRVLDNEALYKAWLSSETVLPVYCVDPRLFATTYHFGFPKTGALRAQFLLECLADLRKNLMKRGLNLLVQHGKPEEILPSLAKSFQAHTVYAQKETCSEELNVERLVMRGLKQVVTSPEESSGITVSNNIPKLQLVWGTTMYHLDDLPFDATSLPDVYTQFRKLVETKCTIRSCIKLPASLGPPPTVQDWGCLPSLEQLGLSSQSVNKGMKFVGGETAALSRVYEYFWKKDLLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIYEEVKRYENDRLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRKVQRNWSQDKNLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRKIPKEKRNFPGNLIYIPQIVPLKFGTTSGHNKDKFFGARRTNDRGSKRR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0634 584 Gene3D - 238 407 - -
Gso4g0634 584 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 309 544 IPR036134 -
Gso4g0634 584 Pfam FAD binding domain of DNA photolyase 387 541 IPR005101 -
Gso4g0634 584 PRINTS DNA photolyase signature 434 450 IPR002081 -
Gso4g0634 584 PRINTS DNA photolyase signature 454 472 IPR002081 -
Gso4g0634 584 PRINTS DNA photolyase signature 493 507 IPR002081 -
Gso4g0634 584 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 90 225 IPR006050 -
Gso4g0634 584 PANTHER CRYPTOCHROME 77 563 IPR002081 -
Gso4g0634 584 PANTHER CRYPTOCHROME DASH 77 563 - -
Gso4g0634 584 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 89 288 IPR036155 -
Gso4g0634 584 Pfam DNA photolyase 92 274 IPR006050 -
Gso4g0634 584 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 408 563 - -
Gso4g0634 584 Gene3D HUPs 54 237 IPR014729 -
Gso4g0634 584 TIGRFAM crypto_DASH: cryptochrome, DASH family 91 533 IPR014133 GO:0003913|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0634 Gso-Chr4 6169215 6174598 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0634 K25656 - gmx:100783312 1163.67