Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0607 ATGGAAAGTGAGAGTGAGGTGACGATGATCCCATGTTTTGATTTTTGCAAGGCATTAGAAGAAGGCAGTGAGGAATGGAAAGAGATGAGCAAGAAAGTGAGAGAAGCATGTGAGAGTCATGGCTACTTCCTCTTGATGTGTGATGAGATCATCCCTGAGAGTGTACGTGAAGAGATGTTTGATGGTATGAAAGAATTGTTTGATTTGCCTGAAGAAACAAAGCAGCAACACATATGTCAAAAGCCTTATAGGGGCTACATTGGCAAGAACTCTATCATTCCCCTCTGTGAAAGCTTTGGGGTCGATGATGCTCCTTTCTCAGCTACGGCTGAGGCCTTATCAAACCTCATGTGGCCTCAAGGAAACCCACATTTCTGTGAGACACTGAAGACGATGAGCTTAAAGATGTTAGAATTAAGTTTCATCGTCATGAAAATGATTGTGGAGGGTTATGACCTTCCCCAACATTACATATTGGATGTTAAAAACATGAAGAGTTCTAGCTATTCACGATTGATCAAGTACAAAGTTCCTGAAAGCAACAATGACTTAGAGACTGCCCTGCCGCCTCACACTGACAATAGTGCCATAACCATTTTATGCCAACATAAAGTCCAGGGGCTCCAGGTGTTATCCAAAATAGGAAAATGGATTGAATTGGAGATACCCCAAGATGGCTTTGTGGTCATTGTTGGTGATATACTAAAGGCATGGAGCAATGGGAGGCTTCATGCAGTCACACACAGAGTGGCATTGAGCGGAGGCAACGAGAGGTACTCGTTTGGGCTTTTTGCAATGCCAAAGGAAGAGATGGACATTGAGGTGCCCCCTGAGTTAGTCGATGACCAAATTCATCCCCTTCGTTATCGCCCATTCAATTATGGAGAGTACTTCAACTACTTTGTTTCAAATCCCAGAGAAGCTCTTGAAGTGTTTGCATGTCTTTGA 948 0.4325 MESESEVTMIPCFDFCKALEEGSEEWKEMSKKVREACESHGYFLLMCDEIIPESVREEMFDGMKELFDLPEETKQQHICQKPYRGYIGKNSIIPLCESFGVDDAPFSATAEALSNLMWPQGNPHFCETLKTMSLKMLELSFIVMKMIVEGYDLPQHYILDVKNMKSSSYSRLIKYKVPESNNDLETALPPHTDNSAITILCQHKVQGLQVLSKIGKWIELEIPQDGFVVIVGDILKAWSNGRLHAVTHRVALSGGNERYSFGLFAMPKEEMDIEVPPELVDDQIHPLRYRPFNYGEYFNYFVSNPREALEVFACL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0607 315 Gene3D - 8 312 IPR027443 -
Gso4g0607 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 314 - -
Gso4g0607 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 314 - -
Gso4g0607 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 165 267 IPR005123 -
Gso4g0607 315 Pfam 2OG-Fe(II) oxygenase superfamily 175 265 IPR044861 -
Gso4g0607 315 SUPERFAMILY Clavaminate synthase-like 6 304 - -
Gso4g0607 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 88 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0607 Gso-Chr4 5875326 5877608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0607 10 297 Glycosyltransferase AT5G59530 24.832 3.51e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0607 - - gmx:100790408 651.358