Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0542 ATGGCGTCCAAGAAGAAGCACTCAGAGGGCATCGCCTTGTTGTCCATGTACAACGACGAGGAAGACGACGAAATGGAGGACGCAGAAGACGAAGGCGACGAAGAAGAAGGTGATGCAGGGATGCGGATGGAAGAAGATGCCGCCGGAGATGCGAGATTTGCAGCGGAGGAAGATTCCGCCAATAGAACAGCCATCGTTGATTCCGGCAACGAGGGCGGCGCTGATGAGGGGTTCATTCCGGCGGAGAAGAGTAGGGTTGGGACTTCGACGCCGCAGACGAACAATTTGATCTCTCCACCGCTGGAGCAACCGAGGATTGGTCGGAAAGGGGCGCTTACGATAGTGGATTATGGGCATGATGAAGTGGCAATGTCACCTGAGCCTGAGGAGGGAGAGATATATGGTAGCGTTCGAGTCGTGATTGGGGATCAGCTTCATGCCACCAACGGTGATTTTCAAGACAGAACACCTTTGGGAACAGTCCAAGTTTTGACACCTAGCAATCAAGCTAACACTCCCCAGTTCTCTGAGCCATTGAAATCTGATACCATGAACAATGATGCTGTGATCAGATCAGAGGATGCAGAACTTGGAGAAGCTGATCAAGAAGAGCAAAAATATGTAGATCCATTGGATAAATTTCTCCTTCCCCCACCAAAAGCTAAATGCTCGGAGGAGCTACAAAGAAAAATAAATAAATTCCTGGAGTATAAGAAGGCTGGAAAAAGCTTTAATGCAGAAGTTCGCAACAGGAAGGACTATCGTAACCCTGACTTCTTACTGCATGCAGTGAGGTACCAGGATATTGATCAAATAGGGTCTTGCTTCAGTAAAGATGTATTTGACCCTCATGGATATGATCAAAGTGACTTCTATGATGAACTAGAAGCTGATATGAGGCGCGAAAGTGAGAGGAAAGAGCAAGAGAAGAAGAAAGCACAGAAGGTTGAATTTATTTCAGGGGGTGCACAACCAGGAATTGTAGCTAGTGCTCCTAGGATTAGCATGCCTGTTGCAGGTGTTTCTGCTGTGACTGCAGGTGGTTTGCCTTTGGTGCCTGCTACTTCTGATTCTATTAATCGGGATGGTAGACAGAATAAAAAATCAAAATGGGATAGGGTGGATGGTGATAGAAAAAATTCTCTGCCCTCTGCAGGGCAGGATTCTGTATCTACTATTGGGGCTCATGCAGCAATTTTATCTGCTGCTAATGCCGGTGGTGGATACATGCAATTTGCGCAACAAAAAAAGCGGGAGGCTGAGGAGAAAAGATCTAGTGAAAGGAGGGTAGAGAGAAGGTCGTGA 1305 0.4713 MASKKKHSEGIALLSMYNDEEDDEMEDAEDEGDEEEGDAGMRMEEDAAGDARFAAEEDSANRTAIVDSGNEGGADEGFIPAEKSRVGTSTPQTNNLISPPLEQPRIGRKGALTIVDYGHDEVAMSPEPEEGEIYGSVRVVIGDQLHATNGDFQDRTPLGTVQVLTPSNQANTPQFSEPLKSDTMNNDAVIRSEDAELGEADQEEQKYVDPLDKFLLPPPKAKCSEELQRKINKFLEYKKAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDQSDFYDELEADMRRESERKEQEKKKAQKVEFISGGAQPGIVASAPRISMPVAGVSAVTAGGLPLVPATSDSINRDGRQNKKSKWDRVDGDRKNSLPSAGQDSVSTIGAHAAILSAANAGGGYMQFAQQKKREAEEKRSSERRVERRS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0542 434 MobiDBLite consensus disorder prediction 1 104 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 298 317 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 42 57 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 415 434 - -
Gso4g0542 434 Coils Coil 292 316 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 85 100 - -
Gso4g0542 434 Pfam HCNGP-like protein 217 308 IPR012479 GO:0006355
Gso4g0542 434 MobiDBLite consensus disorder prediction 361 379 - -
Gso4g0542 434 Coils Coil 11 38 - -
Gso4g0542 434 Coils Coil 410 433 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 411 434 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 164 186 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 298 316 - -
Gso4g0542 434 MobiDBLite consensus disorder prediction 350 390 - -
Gso4g0542 434 PANTHER TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP 1 406 IPR012479 GO:0006355
Gso4g0542 434 MobiDBLite consensus disorder prediction 16 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0542 Gso-Chr4 5228131 5235000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0542 - - gmx:100527074 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0542 4 5228131 5235000 Gso6g0537 6 4967949 4973429 GST