Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0485 ATGCTTCCCTCATTTCTAAGCCTGGTGTCAGTGTACAGCCTCTACCTCCGACGCTGCTTCACGGGCGCGGGGCTCTCATCGCAGACGCTTAGAGTGGACGACGAATCCACGCTCCACTTCTGGGCCCCGACAAACCCAACGGCCCAGAAGCCTTCCCTGGTTCTGATCCACGGGTTTGGGCCGGAGTCCATATGGCAGTGGCGCAAACAGGTCCAATTCTTAGCCCCTCACTTCAACGTGTACGTTCCGGACCTAATATTCTTCGGAGGATCGAGCACCAAGTCCAGCGAAAGGAGCGAAACGTTTCAGGCAGCGTCGGTGGGGAAGCTTTTGGACAAGTTGGAGGTTGAGAAGTTCCACGTGGTGGGGACGAGTTATGGGGGCATGGTGGCTTACAATTTGGCCAAGATGTTGGGTGAAGACAGGGTGCAAAAAGTGGTTATTGCTAGCTCCGGTGTGAACATGATCAAGAGCAGCAACGTGGCGTTGGTGCAGAGGGCGCAACTGGAGAAGATTGAGGATCTGATGCTGCCTCCTACGCCACAACACTTGCGAATATTGATGAAGTTCTCCATCCACAAGCCTCCCCAACTCTTGCCTGATTTTTTACTCCGGGACTTCTTGGCTAAATTATACGGAGAAAATAGGAAGGAAAAAATGGAGCTTCTGAAAGGGTTAACCGTCGGAAGGGATGATACTTCAAGAATTTCACCTCTTCAACAAGAGGTTCTCATAGTCTGGGGAGAAGAAGACCGAATATTTCCGCTGAAGTTGGCCCACGAACTAAAAGAGATAATCAGTAAAAAGGCAAGATTGGAATTGATAAAGGAGGCATCCCATGTGCCTCAAATGGAAAAGCCAAGAGAATTCAACAACATTCTCCTAAATTTCTTACAGGAGCATTCTTGA 909 0.4983 MLPSFLSLVSVYSLYLRRCFTGAGLSSQTLRVDDESTLHFWAPTNPTAQKPSLVLIHGFGPESIWQWRKQVQFLAPHFNVYVPDLIFFGGSSTKSSERSETFQAASVGKLLDKLEVEKFHVVGTSYGGMVAYNLAKMLGEDRVQKVVIASSGVNMIKSSNVALVQRAQLEKIEDLMLPPTPQHLRILMKFSIHKPPQLLPDFLLRDFLAKLYGENRKEKMELLKGLTVGRDDTSRISPLQQEVLIVWGEEDRIFPLKLAHELKEIISKKARLELIKEASHVPQMEKPREFNNILLNFLQEHS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0485 302 PANTHER SI:DKEY-122A22.2 5 298 - -
Gso4g0485 302 Gene3D alpha/beta hydrolase 18 301 IPR029058 -
Gso4g0485 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Gso4g0485 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Gso4g0485 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Gso4g0485 302 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 298 - -
Gso4g0485 302 Pfam alpha/beta hydrolase fold 51 287 IPR000073 -
Gso4g0485 302 SUPERFAMILY alpha/beta-Hydrolases 25 300 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0485 Gso-Chr4 4596615 4599509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0485 233 298 Acyl Lipid Metabolism Gene Families AT3G10840 40.909 6.39e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0485 - - gmx:100812356 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0485 4 4596615 4599509 Gso6g0468 6 4303323 4305096 GST