Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0476 ATGCTAGCTTACCTGGAACACTTCGTTCACGAAAACGACGCCGAATCGAGGCAAGACGACGACGTAGCGACCCTCTCCAAAGCGCTTGAGCTTCAAGCCAGCGTCGAGGAATTCGGTCCCACCGGAGTCGCCGGCAAGGATTTCGGCGGAATCAAGTCCGTCAAACCCTTGGCCCTGATCAGGCCCTCTGCCGCCGCCGACGTCGCCAGAGTGGTGAAGCACGCGGCGGCGTCTTCTAGCCTCACGGTGGCGGCGCGCGGGAACGGCCACTCCATCAACGGCCAGGCCATGGCGGAGCAGGGCCTGGTCCTCGACATGCGCGCCATCCAGGACCCGTTTGAGATTCTCTGGATAGAAGGTTCTCCCTACGTCGACGTTTCGGGAGGGGCATTATGGGAAGACGTCCTTAAACGCTGCGTTTCGGAGTTTGGCCTCGCCCCGAGGTCGTGGACGGATTATCTCAGCTTAACGGTGGGCGGAACGCTCTCCTACGCCGGCGTCAGCGGTCAAACATTCCGTTACGGTCCTCAGACATCGAACGTAACGGAATTGGAAGTTGTAACTGGGAAAGGAGACACACTGTGCTGCTCCCAAACAGAAAACTCTGAACTTTTTTTTGGCGCGCTTGGTGGCTTAGGACAGTTCGGTATCATTACCAGAGCCAGGGTCGTTCTTCAAGAAGCTCCAGATATGGTGAGGTGGATAAGAGTGGTATACTCTGAGTTTGAGGAGTATGCTAGGGATGCAGAGTCGCTGGTGGAGGAATATTGTTTTGATTACGTGGAAGGGTTCGTTCTGGTGAACAGTGATAACCGGGCCAATGGATGGCCCACAGTTCCATTGGGCCCGGAACAAGTGTTCGACCCGACTCATATCCCTTTCACTGCTGGTCCTGTCTTGTATTGCTTGGAGCTCGCTCTTCACTATCGTAACGCGGATCATCCTTCTCGTGTCGATACGGATGTGGATGGATTGCTTGGACGGCTACGATTCATTCAGGGTCTGAAGTTCCAGGTGGACGTGACATACATGGAGTTCTTGCTGCGTGTAAAGCGTGTGGAGGAGCACGCGAAAGGCAACGGAACCTGGGATGCACCTCACCCTTGGCTCAATCTGTTCGTGTCCAAGTCCCACATCGTTGATTTTGATCGTGAGGTGTTCAAGAAGATTCTCAAGGACGGAGTCGATGGACCCATTTTAGTCTACCCTCTCTTGCGAAACAACTATATTGTAAGGAAAATATCCAGCCAGGTCAAATTAATATGCAAGGGGTTTGGTCTTTCGCCAAGTCTAATAATGATTGATGGTAGGATTCCATCTAAATCTAATCGAACCCTATATATGTATGAGCTGATCAACGAACGTCATAGGCTCAGAGAAGATCGATCAAAATCAAAGTATAGTATAATATAA 1413 0.5209 MLAYLEHFVHENDAESRQDDDVATLSKALELQASVEEFGPTGVAGKDFGGIKSVKPLALIRPSAAADVARVVKHAAASSSLTVAARGNGHSINGQAMAEQGLVLDMRAIQDPFEILWIEGSPYVDVSGGALWEDVLKRCVSEFGLAPRSWTDYLSLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGDTLCCSQTENSELFFGALGGLGQFGIITRARVVLQEAPDMVRWIRVVYSEFEEYARDAESLVEEYCFDYVEGFVLVNSDNRANGWPTVPLGPEQVFDPTHIPFTAGPVLYCLELALHYRNADHPSRVDTDVDGLLGRLRFIQGLKFQVDVTYMEFLLRVKRVEEHAKGNGTWDAPHPWLNLFVSKSHIVDFDREVFKKILKDGVDGPILVYPLLRNNYIVRKISSQVKLICKGFGLSPSLIMIDGRIPSKSNRTLYMYELINERHRLREDRSKSKYSII* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0476 470 PANTHER GULONOLACTONE OXIDASE 11 409 - -
Gso4g0476 470 Gene3D - 10 117 IPR016167 -
Gso4g0476 470 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
Gso4g0476 470 Gene3D - 118 230 IPR016169 -
Gso4g0476 470 PANTHER CYTOKININ DEHYDROGENASE 7 11 409 - -
Gso4g0476 470 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 408 IPR016164 GO:0003824|GO:0050660
Gso4g0476 470 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 226 IPR036318 GO:0050660
Gso4g0476 470 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 409 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gso4g0476 470 Gene3D - 232 421 IPR016170 -
Gso4g0476 470 Pfam FAD binding domain 56 196 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0476 Gso-Chr4 4481766 4485840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0476 K00279 - gmx:100795849 820.461