Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0466 ATGGATATCAGGTTGATGGATTTGGACTCTCCATTGTTCAACACTCTGCACCGAATCATGGATCTGACAGAGGACGCAGAGAAGAACTTGAACGCTCCGACGCGGACATACGTGCGCGACGCGAAGGCAATGGCTGCGACTCCTGCGGACGTGAAGGAGTACCCTAACTACTACGTGTTCGTGATCGACATGCCAGGCCTGAAATCCGGGGACATTAAGGTGCAGGTGGAGGATGATAACGTGCTTCTGATAAGCGGCGAGAGGAAGAGGGAGGAGGATAAAGAGAAAGAAGGGGCTAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGAGGAAGTTCACGCTTCCCGAGAATGCCAACACCGATGCTATCTCTGCCGTCTGCCAAGACGGTGTGCTCACTGTCACTGTCAACAAGCTGCCTCCACCTCAGCCCAAAAAGCCCAAGACCATAGAGGTTAAGATCGCCTGA 477 0.5241 MDIRLMDLDSPLFNTLHRIMDLTEDAEKNLNAPTRTYVRDAKAMAATPADVKEYPNYYVFVIDMPGLKSGDIKVQVEDDNVLLISGERKREEDKEKEGAKYLRMERRVGKFMRKFTLPENANTDAISAVCQDGVLTVTVNKLPPPQPKKPKTIEVKIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0466 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 7 158 - -
Gso4g0466 158 Gene3D - 6 157 IPR008978 -
Gso4g0466 158 Pfam Hsp20/alpha crystallin family 50 156 IPR002068 -
Gso4g0466 158 PANTHER 17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED 7 158 - -
Gso4g0466 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 158 IPR002068 -
Gso4g0466 158 SUPERFAMILY HSP20-like chaperones 14 150 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0466 Gso-Chr4 4403363 4404156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0466 K13993 - gmx:111605749 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0466 4 4403363 4404156 Gso6g0444 6 4117490 4118230 GST