Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0456 ATGGATCAGTTCAAAGGACAGCCTCGCCTTCCGAAATTCGTCGTTCCGAAACGCTATGACATTAGGCTCAAGCCCGACCTCGTCGCGCACCGTTTTGCAGGTTCCGTCGCCGTCAACCTCGACATCGTCGCCGCCACCTCTTTCATCGTTCTCAATGCCGCCGAACTCGACGTTAGCAACGACGCCGTTTCATTCACCAACCAAGATTCCTCCAAGGTTATTAAACCTTCTCGAGTTGAGTTGTTTGAAAATGATGAGATTCTGGTTTTGGAGTTCCCAGAGGAATTACCTATTGGCTTCGGTGTCTTGTCCATTCGCTTTGAAGGAATCTTGAATGATAGAATGAAAGGCTTCTACCGAAGTACCTATGAGCACAATGGTGAGAAGAAGACTATGGCAGTTACACAGTTTGAACCAGCTGATGCCAGGCGATGCTTTCCTTGTTGGGATGAACCTGCTTGCAAGGCTACTTTCAAGATCACATTGGATGTGCCTTCAGAGCTCGTTGCTCTTTCCAACATGCCAATTGTTGAAGAAATAACAGACGGAGATCTGAAAACAGTCTCGTATCAAGAATCACCAATTATGTCTACATATTTGGTTGCGGTTGTTGTTGGTTTATTTGATTATGTGGAAGATCATACCTCAGATGGGGTCAAAGTCCGGGTGTATTGTCAAGTTGGTAAGGCAAACCAGGGGAAATTTGCACTTGATGTAGCTGTGAAAACTTTGGAACTATACAAGGGTTACTTTGCCACTCCCTACTCGCTGCCAAAATTGGATATGATTGCAATCCCTGATTTCGCTGCTGGAGCCATGGAGAACTATGGTTTAGTTACATATCGGGAGACTGCTTTGCTATATGATGACCAGCATTCTGCTGCTGCAAATAAACAGAGGGTTGCAACTGTAGTAGCTCATGAACTAGCACACCAGTGGTTTGGCAACCTTGTTACAATGGAGTGGTGGACACATTTGTGGCTGAATGAGGGGTTTGCAACATGGGTGAGCTATTTAGCCACTGATAGCTGTTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATCTACTGAGGGTCTTAAGCTGGATGGACTTGCGGAGTCCCACCCAATTGAGGTAGAGATCAATCATGCTTGTGAGATTGATGAAATATTTGATGCAATAAGTTATAGAAAAGGTGCATCTGTAATTAGGATGCTGCAAAGCTATCTTGGTGCCGAATGCTTTCAGAGGTCGCTGGCTTCATATATAAAAAGACATGCTTGCTCAAATGCTAAGACTGAGGATCTATGGGCTGCACTTGAGGAAGGATCTGGTGAACCTGTGAACAAGTTAATGACCTCATGGACAAAGCAGAAGGGATATCCTGTTGTATCTGTTAAAATCAATGATCAGAAATTGGAATTTAATCAGTCGCAATTCTTGTCAAGTGGTGCTCAAGGAGAAGGCCATTGGATTGTTCCAATAACATTATGCTTTGGCTCTTATGATGTCCACAAGAGTTTCCTCTTGCAATCAAAATCTGAAACACATGATGTCAAAGATTTCCTTGGTTCCACACACAAAGGTTTAAATTGTTGGATTAAACTTAATGTGGATCAGGCTGGTTTCTACAGGGTGAAGTATGATGAGCTGCTTGCTGCTAGACTTAGATATGCAGTAGAGAAACAACTCTTATCTGCATCAGACCGATTTGGCATTTTGGATGATTCATTTGCACTTTGTATGGCTTGCCAGGAATCATTGACCTCCTTGATTAACTTGATGGGATCTTACAGGGAGGAAGTTGATTATACCGTGTTGTCTAACCTGATAACTGTAATGTTATTTTTCAAATCTTGTTCATTCATTACTTGGGTTATATATGTTGGACATAATTCCAATTCTTTTGTTTGGCAGATAAGTCTTAAAGTTCAACGTATTGCAGCTGATGCAGTACCAGACTTACTAGAATATTTCAAGCAGTTCTTTATTAACCTTTTTCAGTACTCTGCTGAGAGGCTTGGTTGGGAGCCTAAACCAGGAGAGAGTCATGTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCCCTTGCTATGTTTGGTCACGATTTAACACTGGATGAAGCAAGCAAGCGTTTTCAGGCATTCTTAGAAAACAGAAATACACCACTTCTTCCACCTGATATAAGAAAGGCGGCATATGTAGCTGTAATGCAACGGGCAAGCAAATCTAACAGATCGGGTTATGAATCCCTTTTGAAAGTATATAAGGAAGCTGACCTAAGTCAGGAGAAAACACGTATTCTGGGCTCTCTGGCATCTTCACGTGATCCAGATCTAATTCTTGAAGCTCTAAACTTCATGTTGTCATCTGAGGTTCGTAGTCAGGATGCTGTTTTTGGACTTGCTGTTACCCGGGAAGGACGAGATGTAGCTTGGGCATGGCTTAAGGAAAATTGGGAACACCTCATAAAAACATATGGTTCAGGATTTTTGATAACTCGGTTTGTCGGTGCAGTTGTCTCACCGTTTGCTTCCTTTGAGAAGGCCAAGGAGGTAGAGGAATTCTTTGCTACCCACGCTATGCCATCCATTGCTAGAACGTTAAGGCAGAGCCTTGAGCGGGTCAAAATCAATGCAAATTGGGTTCAGAGTGTTCAGAACGAAAATAGGCTTGGTGATGCTATGAAGGAATTGGCATACAGAGTTTACTAG 2703 0.4266 MDQFKGQPRLPKFVVPKRYDIRLKPDLVAHRFAGSVAVNLDIVAATSFIVLNAAELDVSNDAVSFTNQDSSKVIKPSRVELFENDEILVLEFPEELPIGFGVLSIRFEGILNDRMKGFYRSTYEHNGEKKTMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPIVEEITDGDLKTVSYQESPIMSTYLVAVVVGLFDYVEDHTSDGVKVRVYCQVGKANQGKFALDVAVKTLELYKGYFATPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSCFPEWKIWSQFLHESTEGLKLDGLAESHPIEVEINHACEIDEIFDAISYRKGASVIRMLQSYLGAECFQRSLASYIKRHACSNAKTEDLWAALEEGSGEPVNKLMTSWTKQKGYPVVSVKINDQKLEFNQSQFLSSGAQGEGHWIVPITLCFGSYDVHKSFLLQSKSETHDVKDFLGSTHKGLNCWIKLNVDQAGFYRVKYDELLAARLRYAVEKQLLSASDRFGILDDSFALCMACQESLTSLINLMGSYREEVDYTVLSNLITVMLFFKSCSFITWVIYVGHNSNSFVWQISLKVQRIAADAVPDLLEYFKQFFINLFQYSAERLGWEPKPGESHVDAMLRGEILTALAMFGHDLTLDEASKRFQAFLENRNTPLLPPDIRKAAYVAVMQRASKSNRSGYESLLKVYKEADLSQEKTRILGSLASSRDPDLILEALNFMLSSEVRSQDAVFGLAVTREGRDVAWAWLKENWEHLIKTYGSGFLITRFVGAVVSPFASFEKAKEVEEFFATHAMPSIARTLRQSLERVKINANWVQSVQNENRLGDAMKELAYRVY* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0456 900 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
Gso4g0456 900 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Gso4g0456 900 Gene3D - 457 544 - -
Gso4g0456 900 PANTHER AMINOPEPTIDASE 3 610 - -
Gso4g0456 900 PANTHER AMINOPEPTIDASE 627 896 - -
Gso4g0456 900 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
Gso4g0456 900 CDD M1_APN-Q_like 18 453 IPR034016 -
Gso4g0456 900 Pfam ERAP1-like C-terminal domain 529 873 IPR024571 -
Gso4g0456 900 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 627 896 - -
Gso4g0456 900 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 610 - -
Gso4g0456 900 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Gso4g0456 900 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
Gso4g0456 900 Gene3D - 546 887 - -
Gso4g0456 900 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Gso4g0456 900 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Gso4g0456 900 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Gso4g0456 900 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Gso4g0456 900 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Gso4g0456 900 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0456 Gso-Chr4 4327672 4334266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0456 K08776 - gmx:100811437 1717.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0456 4 4327672 4334266 Gso6g0437 6 4056442 4062820 GST