Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0445 ATGCAAGGCATAGGGATAGGGTGCTGCTCAAACGACGTCGTAGGGCAGCTGGAGCTAAGTCCCACTATGAGCAACTCCTCTTCCTCGCTATCGATGGAGCTGGACGAGTCCCCCGAGAGCCGAATCCAACGGCTGATATCGGAGCACCCCGTCATCATCTTCACCCGATCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCCACCCCACCGTCATCGAATTGGACGACCACGAGATCGCCTCCCTCCCCCTCCCCGACACCACCGCCCCCGCCGCCTTCATCGGCGGCACATGCATCGGCGGCCTCGAATCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCATCCCCAAACTCGTCCAAGTCGGCGCTCTCTGGTTTGGCAGAATTTAG 411 0.6156 MQGIGIGCCSNDVVGQLELSPTMSNSSSSLSMELDESPESRIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVHPTVIELDDHEIASLPLPDTTAPAAFIGGTCIGGLESLVALHVSGHLIPKLVQVGALWFGRI* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0445 136 TIGRFAM GlrX-like_plant: glutaredoxin-like family 42 132 IPR011905 -
Gso4g0445 136 CDD GRX_GRXh_1_2_like 50 124 - -
Gso4g0445 136 ProSiteProfiles Glutaredoxin domain profile. 39 132 - -
Gso4g0445 136 Gene3D Glutaredoxin 32 133 - -
Gso4g0445 136 Pfam Glutaredoxin 51 105 IPR002109 -
Gso4g0445 136 PANTHER GLUTAREDOXIN-C6 14 132 - -
Gso4g0445 136 PANTHER GLUTAREDOXIN 14 132 IPR011905 -
Gso4g0445 136 SUPERFAMILY Thioredoxin-like 40 132 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0445 Gso-Chr4 4199877 4201147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0445 41 133 Miscellaneous Gene Families AT4G15660 41.584 3.95e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0445 - K03676 gmx:100791969 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0445 4 4199877 4201147 Gso6g0427 6 3948859 3949832 GST
Gso14g0850 14 9437313 9438299 Gso4g0445 4 4199877 4201147 PCT
Gso4g0445 4 4199877 4201147 Gso14g0850 14 9437313 9438299 PCT