Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0442 ATGTCCGACCCAGCTTCCAAACCCAACGGAAACGCCGCGGCCGCCACTAACGGCAATCCCGGACCCGTTAAGTCTCAACTCTACAACCCCAACCGTCAAGTTTACCGGCCGCAATCGCACTACCACCGTCGCGGCCAACGCTCCCACCGCAACTTCTGCTGCTGCTGCTGCTTCTGGACCATCCTCACCCTCCTCGCGGTGGCTCTCCTCGCCGCCATTGTCGGCGCCGCACTTTACGTACTCTACCGCCCTCACCGTCCCGAATTCTCCGTCACAAACCTCCGCATTGCGAAGATGAACCTCACCACTTCCGCCGACTCCCCTTCCCACCTCACCACGCTCTTCAACCTCACTCTCATCGCGAAGAACCCTAACAACCACCTCGTCTTCTTCTACGACCCGTTCTCCGTGACGGTGTTCTCGAACTCCGTCCCCGTCGGAAACGGTTCCGTTACGGCGTTTACTTCGGACAAGAACAACCAGACGAGCCTCCGCGCGGTGCTGTCGGGGTCCCAAGATCTGGACACGGACTCGTTGACTAGCCTGAGATCGGGGCTGAAGATGAAGAGAGGTTTCCCCGTGGAGATTCAGATGGACACCAAGGTGAAGATGAAGATGGATTGGCTCAAGAGCAAGAAGGTCGGAATTCGAGTCACCTGCGACGGAATCAGAGGAACCGTTCCCTCCGGCAAGTCTCCGGCGGTGGCCTCCGTCGTCGACTCCGAGTGTAAGGTGGATCTTCGAATCAAGATCTGGAAGTTCTCCTTTTAA 771 0.5798 MSDPASKPNGNAAAATNGNPGPVKSQLYNPNRQVYRPQSHYHRRGQRSHRNFCCCCCFWTILTLLAVALLAAIVGAALYVLYRPHRPEFSVTNLRIAKMNLTTSADSPSHLTTLFNLTLIAKNPNNHLVFFYDPFSVTVFSNSVPVGNGSVTAFTSDKNNQTSLRAVLSGSQDLDTDSLTSLRSGLKMKRGFPVEIQMDTKVKMKMDWLKSKKVGIRVTCDGIRGTVPSGKSPAVASVVDSECKVDLRIKIWKFSF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0442 256 SUPERFAMILY LEA14-like 68 198 - -
Gso4g0442 256 PANTHER HARPIN-INDUCED PROTEIN 7 255 - -
Gso4g0442 256 Gene3D - 80 219 - -
Gso4g0442 256 MobiDBLite consensus disorder prediction 1 28 - -
Gso4g0442 256 Pfam Late embryogenesis abundant protein 121 220 IPR004864 -
Gso4g0442 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0442 Gso-Chr4 4175085 4176475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0442 30 249 EF-hand Containing Proteins AT5G21130 30.263 2.36e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0442 - - gmx:100786652 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0442 4 4175085 4176475 Gso6g0425 6 3931006 3932308 GST