Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0405 ATGACACATGGTGCATATGATGGGTTGATTGCTACACCCAAAAAAATTAATGATTTTGTTGATGGTGAAGATGAAAGAGCAAGTTCAAAGTCACGGAAGGGAGTAAGACTATGGAGAAAATTAAAATATCAGCTTATAGAATACAATTCACTGCCAGCCTACATGAGGGACAACGAATTTATATTGGGTTATTATCGAGCAGATTGGCCATTGAAGCAGATCTTCCTTAGCATTTTCTCAATTCATAATGAGACACTTAATGTCTGGACGCATTTGATTGGGTTCTTCCTTTTTCTCTTTCTCACCATATACACAGCTATGAGAGCTCCAATGGTTGTGGATTTCAATTCTGTTCAAGATTTGTCTGAAATGATAGGGAAAGCTGATTTGAATATGATTCGTTTAGATCTCTTAAAATGCCTGGCTTCACTGCCCAACATGCCCGAGATTCTCAAATTAAATGACTTGAGTGAATCTCTTTATTCTTTGGACTTCTCCTCATTATCAGGTTGGACTCTTGTGGAACTTCTCACCAATTGCTTGCCTGAGCAGTTTTCCCTAAATGGTCTGAAAGGTGACATGAACATGGTATCCCCCTTAATGCAACCGATTACAAGGTGGCCTTTCTATGCCTTCTTAGGTGGGGCTATGTTCTGCTTGCTAGCCAGCAGCGCATGCCACCTCCTTACTTGCCACTCACAGCGCCTTTCCTACATCATGCTCAGAATTGACTATGCTGGGATTGCTGCATTGATTGCAACTTCATTTTACCCTCCTGTGTATTACTCATTTATGTGCAATCCCTTTTTTTGCTACCTCTACTTGGGCTTCATAACACTAATGGGGATTACTACTATTGTCTTCTCTCTTCTCCCATTTTTCCAAAAGTCCGAGTTCAGGAAGTACCGCGCTTCCCTCTTCTTTTTAATGGGGTTTTCAGGTGTGGCACCAATAATACATAAGCTGATACTGCACAAGCATCAACCTGAGGCCTTGCAAACTACTGGTTATGAGATACTAATGGGAGTTCTTTATAGTTTGGGAGCACTAATCTATGTCACAAGGATACCAGAGAGGTGGATGCCTGGCAAGTTTGACATTGCTGGCCACAGTCACCAACTCTTTCATATCTTGGTTGTGGCAGGGGCATACACACACTATCATGATGGGTTGATCTATCTAAGATGGAGAGATTCTCAAGGTTGCTAG 1209 0.416 MTHGAYDGLIATPKKINDFVDGEDERASSKSRKGVRLWRKLKYQLIEYNSLPAYMRDNEFILGYYRADWPLKQIFLSIFSIHNETLNVWTHLIGFFLFLFLTIYTAMRAPMVVDFNSVQDLSEMIGKADLNMIRLDLLKCLASLPNMPEILKLNDLSESLYSLDFSSLSGWTLVELLTNCLPEQFSLNGLKGDMNMVSPLMQPITRWPFYAFLGGAMFCLLASSACHLLTCHSQRLSYIMLRIDYAGIAALIATSFYPPVYYSFMCNPFFCYLYLGFITLMGITTIVFSLLPFFQKSEFRKYRASLFFLMGFSGVAPIIHKLILHKHQPEALQTTGYEILMGVLYSLGALIYVTRIPERWMPGKFDIAGHSHQLFHILVVAGAYTHYHDGLIYLRWRDSQGC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0405 402 Pfam Haemolysin-III related 79 387 IPR004254 GO:0016021
Gso4g0405 402 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 1 402 IPR004254 GO:0016021
Gso4g0405 402 PANTHER HEMOLYSIN-III-LIKE PROTEIN 1 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0405 Gso-Chr4 3681822 3684608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0405 K07297 - gmx:100782422 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0405 4 3681822 3684608 Gso4g0405 4 3681822 3684608 ECH
Gso4g0405 4 3681822 3684608 Gso6g0383 6 3557914 3561547 GST