Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0401 ATGGTGTTTGGGCAAGTAGTGGTTGGTCCTCCTGGCTCTGGAAAAACAACTTACTGCAATGGCATGTCTCAGTTTCTCAGTCTTATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCCGCTAATGATTCGTTACCCTATGAATGTGCTGTGAACATCGAGGATCTCGTGAAACTAAGTGATGTAATGGTGGAACATTCGCTTGGACCAAATGGAGGTCTTGTGTATTGTATGGATTATCTTGAGAAAAATATTGACTGGTTGGAAGCAAAATTGGAACCTCTTCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTTTTTTTTCTCCATTCAAGTGCCAAGAATGTCATCCTGAAGCTCATAAAGAAATTGAACCTAAGGCTAACTGCAGTGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGATTTTATCCTTGTCCACAATGCTACATCTAGAACTCCCTCACATAAATGTCTTGTCAAAAATTGATTTAATTGAGAGCTATGGAAAGCTAGACGTGCAAGACTTGTCATATTTACAACACCATCTGGATCAGGATCCTCGTTCTGCTAAGTACAGAAAGCTCACAAAGGAATTATGTGACATTATTGAAAACTTCAGTCTTGTGAGTTTTTCAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGGTACATATTTGTTGGGATGGAAGCAAGTGCAGTTGAATTTAGCAAGATTGCGGTTGGTCCTGTCAATTGGGATTATTATAGAGTTGCAGCAGTGCAAGAGAAGTACATGAAGGATGATGAAAATATTGATGATAATGAATGA 882 0.3923 MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKNVILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIESYGKLDVQDLSYLQHHLDQDPRSAKYRKLTKELCDIIENFSLVSFSTLDIQDKESVGNLVKLIDKSNGYIFVGMEASAVEFSKIAVGPVNWDYYRVAAVQEKYMKDDENIDDNE* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0401 293 CDD GPN2 3 244 - -
Gso4g0401 293 PANTHER GPN-LOOP GTPASE 2 1 286 IPR030231 -
Gso4g0401 293 Pfam Conserved hypothetical ATP binding protein 7 247 IPR004130 -
Gso4g0401 293 Gene3D - 4 256 IPR027417 -
Gso4g0401 293 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 286 IPR004130 -
Gso4g0401 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 247 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0401 Gso-Chr4 3657860 3663791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0401 K24104 - gmx:100781338 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0401 4 3657860 3663791 Gso4g0401 4 3657860 3663791 ECH
Gso4g0401 4 3657860 3663791 Gso6g0380 6 3534193 3539464 GST