Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0383 ATGAAGTCCCAAATGAAGAAAAAAAGAGTGACTCCCATTCCCAACACTCCTTGCAACGTGGCGGAAGGTTCCTGCAGGGGTCACCTTTGCATCAAGCCTTGTTGTTTCTTCTGCAGCATGAGAGAACCAGACGCATCTCTCAGAAGGGCTGGAATAGCGACCTGCTTCAGAGAAATGCCTCAAGCTCAGGGAGAGAATCATCATGAACACGTGTTGGTGCTGAGTGGACTATGGCACATCGCAATGAGCCAACCCAACGACTCAGAGTTCCCATCCCTCGGCATATTCAAGTGCATGGCAAGTCTAATCCACAAAGGCATAAACGACAGACACTGGCTTCTCACAAATCAAAACATATACATACCCTATTACGCTGCTCACATCATTGGCTCTTACACAATGAACAAGGAGGAGTTTGCACAAAAAGCCGTGCAATCAGGTGTGATACCCCCATTATTGGACTTGCTTAGTGGGAAAATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACTTTCGAATCAGTAGCACAGCACGAACAAGAAGTGGTGAAACTGGCCTTGAAATTGGCTTCAACTTGTTTACAAGTGGTCTATGTTGACTTCGTAGCTTTGAAGGAAAACAAAAGGCTCGAGTACCACAGAAACTTGATGACCAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTACCTTCTGAATTGCTTTGCTTGCAAAGATAGGTCTTTGGATCTCATTTGCAAAAAAGTGTTTCTCAAGGACTTATGTGATATGTGGGGTGGGTTGATAAGTCACACGTCACCAGCAGGGGTTGGACTGATAAGAATCTTGTGTTATAGCAAAGTAGGAAGGAAAAACATTGCTGAATTACCAAAAGTTGTGAACACTCTAGGCAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTTCTTCTGCTTCTCAAGGACCCAGATACGAGGTACAAAGTTCTTGATGTTGCTGCTTCTTACCTTGTTGATTTGATTGAACTTAGAAGCCTTGGGGATAAATCCAACGTGGGTGAGACCATCTCAAAGGTTCTCCTGAATTTGAAACCTAACAGAGAAAAAGTTGGAGCAGCATTATTGCAAGAGGTGGTGGATAGGAGGAACAAGGAGAAGCTGCTCTCGGAGGAAAAGTTAGAGGAAACAAGGGTTTTGGTGAGTTTGATAAAGCAGCAAGCGAACCACATGTTCAGGTTGGGAGAGGTTGAAGAGGCATTGTTGAAATACTCTGAAGCGCTCGGTGTTTGTCCCTTGAGGTTTAGAAAAGAGAGAATGGTGATATATAGTAACAAAGCGCAGTGTCATATTCTTCTTAAGAACGCAGATTCTGCGATCAGTGACTCAACGCGTGCTCTTTGCCTGTCCAACCCAGCAAACACTCACAGGAAAAGCCTTTGGAGGAGGTCACAGGCATATGATATGAAAGGAATGGCGAAAGAGAGCCTCATGGACTGCATAATGTTCATTAACATGACCATGCGTGTGAAGATTCCTTACCACGCAGCGCGCATGATCTCCAAACACATGGAGGCCACGTGGCTCTTTGCCACTGCTCGCTCGAAGGTGGAAAAAACAACGCAAGAATTGAACCAAGTTGGCGGGGATAATGAGAACGGTGGCAACCATGAAGAGCAACCGCGTGATCATAAGGCGAAGATGATGATGATGGAAAACAGATACAACAATCTCTTACACGGTCTGTCAACCATTATTGAAGAACCTTTTCACGCAAAAGAAGCTGGTAGGAGAAAGATGGAAAGGGCGAGAAGGAGATTCAACAAAGGTGTTGTGGCTGGACCAACGTAA 1914 0.4525 MKSQMKKKRVTPIPNTPCNVAEGSCRGHLCIKPCCFFCSMREPDASLRRAGIATCFREMPQAQGENHHEHVLVLSGLWHIAMSQPNDSEFPSLGIFKCMASLIHKGINDRHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQKAVQSGVIPPLLDLLSGKISWVEQRVAVRALGHLASYKSTFESVAQHEQEVVKLALKLASTCLQVVYVDFVALKENKRLEYHRNLMTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRSLDLICKKVFLKDLCDMWGGLISHTSPAGVGLIRILCYSKVGRKNIAELPKVVNTLGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVLDVAASYLVDLIELRSLGDKSNVGETISKVLLNLKPNREKVGAALLQEVVDRRNKEKLLSEEKLEETRVLVSLIKQQANHMFRLGEVEEALLKYSEALGVCPLRFRKERMVIYSNKAQCHILLKNADSAISDSTRALCLSNPANTHRKSLWRRSQAYDMKGMAKESLMDCIMFINMTMRVKIPYHAARMISKHMEATWLFATARSKVEKTTQELNQVGGDNENGGNHEEQPRDHKAKMMMMENRYNNLLHGLSTIIEEPFHAKEAGRRKMERARRRFNKGVVAGPT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0383 637 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 2 626 - -
Gso4g0383 637 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 2 626 - -
Gso4g0383 637 SUPERFAMILY TPR-like 423 525 IPR011990 GO:0005515
Gso4g0383 637 SMART arm_5 136 177 IPR000225 GO:0005515
Gso4g0383 637 Gene3D Tetratricopeptide repeat domain 421 547 IPR011990 GO:0005515
Gso4g0383 637 Gene3D - 98 402 IPR011989 -
Gso4g0383 637 SUPERFAMILY ARM repeat 113 379 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0383 Gso-Chr4 3509339 3512678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0383 - - gmx:100777591 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0383 4 3509339 3512678 Gso4g0383 4 3509339 3512678 ECH