Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0373 ATGGAAATGGGGATTTCCAAGACAACAACAAGCACTGAGGTTACCGACGACAATTCCAATAGCAGCAGCACCACTCATACTCAAACTCGCAACCATATCTCCTTTGCTGCTCCCTACGCCGTAGGAGAAAAGGTCTTAACCAATCATTCTGATTGTCTTTACGAAGCCAAGGTGAGGCAAGTTGAGTACCGCAACACTAAAGGATGGCAATTCCTCGTTCACTATCTTGGTTGGAAGAAGAGATGGGATGAATGGCTTGACCTGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACATGACCTTGACGAGAAGCTTGGCAATGATAAGAATGCAAAAGTCCCGCGTGGTTCTCTGGCGAAGTCCAAGCCTACTAACGTTTCAAGAGGCAGGAAACGAAGGAATGAATCTGTCATCAAGGGAAAACCTGCAGTTGATCCTGACAAGCTTGTTAACATTCAAATTCCTCCAACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTCGGCAAGCTTGTTAAACTCCCTCGTACTCCTAATGTGAAAGGCATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGGTGGGTGATTCAGTTGAAGAAATTATGAAAGGATTGTCTTGTTACTTCGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAACGAGCGCCAACAGTACCAAGAGGCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGTTAAGCTGCCCGAGTTACTGTTTCATGCTAGTGTTGAAGAGGAGACATTGATGGAACTTCAAGCACACTTAATTGACTTTCTCAGGTTTCAATGTTTTCCTCCAGGTTCTTGCAAAAAAACCAGAGCACATTCTTCCTTTCTACTTATCATGTTGCAGAAGGTATTGAGAACAGCACCAACAAACAAGTGTGTTTGCCTTGTTAAGCCTGCATATGTTTATGTATGGACGCAACCTGTTCATGTGGAAGAACACAAGAATCAATTACATATGCTTCTAAGGGCTGCAAACTTTTTTCCTAGCCAAATTGATGTCATTCCTGGAGTTCTGCTTCTGGTTAGTCTAGTGACTATCACTTTTCCTGGTTATTTATAA 1158 0.4171 MEMGISKTTTSTEVTDDNSNSSSTTHTQTRNHISFAAPYAVGEKVLTNHSDCLYEAKVRQVEYRNTKGWQFLVHYLGWKKRWDEWLDLDRLMKHTEENMRKKHDLDEKLGNDKNAKVPRGSLAKSKPTNVSRGRKRRNESVIKGKPAVDPDKLVNIQIPPTLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKNYFDYRLKKCGSVGDSVEEIMKGLSCYFDKALPVMLLYKNERQQYQEACPANVFPSAIYGAEHLLRLFVKLPELLFHASVEEETLMELQAHLIDFLRFQCFPPGSCKKTRAHSSFLLIMLQKVLRTAPTNKCVCLVKPAYVYVWTQPVHVEEHKNQLHMLLRAANFFPSQIDVIPGVLLLVSLVTITFPGYL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0373 385 Gene3D MRG domain 150 301 IPR038217 -
Gso4g0373 385 SUPERFAMILY Chromo domain-like 36 174 IPR016197 -
Gso4g0373 385 MobiDBLite consensus disorder prediction 1 30 - -
Gso4g0373 385 Pfam RNA binding activity-knot of a chromodomain 41 91 IPR025995 -
Gso4g0373 385 PANTHER CHROMATIN-BINDING PROTEIN 2 382 - -
Gso4g0373 385 MobiDBLite consensus disorder prediction 102 144 - -
Gso4g0373 385 Gene3D - 20 121 - -
Gso4g0373 385 ProSiteProfiles MRG domain profile. 150 317 IPR026541 -
Gso4g0373 385 Pfam MRG 147 291 IPR026541 -
Gso4g0373 385 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 2 382 IPR008676 GO:0005634|GO:0006325|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0373 Gso-Chr4 3417749 3422085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0373 K11339 - gmx:100777259 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0373 4 3417749 3422085 Gso4g0373 4 3417749 3422085 ECH
Gso4g0373 4 3417749 3422085 Gso6g0350 6 3299569 3304195 GST