Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0344 ATGCCGCCATTTTTGTCGACCTCGAAGGCCCTTTGCTCCTTGGCATCGCGCAAAAGTGGCGTGAGTCAATTGATTAGGTCTAGCAAGAGCAGTTGGAAACTCGATGGATGCAGATGCATCACTACCGCCATTACCGGCCATCACATTCAGCCTTCCTTCTCTCGCATTGGCTTTTCCCCTCTCACCGGAGGATTGTGCAATAGTAATACTAATTATAATGTTGTTCAAACAAGACAATTTCTTGGATGCGGAGATGGTGAAGAAGGTATTCTATCCAGAAATTACGAGGAGAGGCGCGTTTTGGGGTACTCTCCAGAGCAATTATTTGATGTTGTTTCTGCTGTTGACTTCTATCATGGTTTTGTCCCATGGTGTCAAAGGTCGGAGATACTTAGACACTATCCAGATGGATCATTTGATGCTGAGTTGGAGATTGGATTTAAATTCCTTGTTGAAAGTTATGTTTCTCATGTTGAATTGGACAGACCAAAGCGTATAAAGACAACTGTGTCGCAGAGTACCCTGTTTGAACATTTGATAAACATATGGGAGTTTAACCCTGGCCCTGTTCCAGGAAGTTGCGATCTTTATTTTTTGGTGGATTTTAAGTTTCAGTCTCCACTTTACAGACAGATTGCATCGATGTTCTTTAAGGAGGTAGCCTCTAGGATGGTTGGTTCATTTACTGAGCGTTGCCGCTTGGTATATGGACCGGAAGTGCGGGTCCTTGAAAACTCGTATGGAAAAAGGGCATAA 756 0.4365 MPPFLSTSKALCSLASRKSGVSQLIRSSKSSWKLDGCRCITTAITGHHIQPSFSRIGFSPLTGGLCNSNTNYNVVQTRQFLGCGDGEEGILSRNYEERRVLGYSPEQLFDVVSAVDFYHGFVPWCQRSEILRHYPDGSFDAELEIGFKFLVESYVSHVELDRPKRIKTTVSQSTLFEHLINIWEFNPGPVPGSCDLYFLVDFKFQSPLYRQIASMFFKEVASRMVGSFTERCRLVYGPEVRVLENSYGKRA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0344 251 CDD COQ10p_like 95 233 IPR044996 GO:0006744|GO:0045333|GO:0048039
Gso4g0344 251 Gene3D - 92 237 IPR023393 -
Gso4g0344 251 SUPERFAMILY Bet v1-like 95 237 - -
Gso4g0344 251 Pfam Polyketide cyclase / dehydrase and lipid transport 102 228 IPR005031 -
Gso4g0344 251 PANTHER SPERM PROTEIN HOMOLOG 1 245 IPR044996 GO:0006744|GO:0045333|GO:0048039
Gso4g0344 251 PANTHER POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0344 Gso-Chr4 3075458 3080261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0344 K18588 - gmx:100778674 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0344 4 3075458 3080261 Gso4g0344 4 3075458 3080261 ECH
Gso4g0344 4 3075458 3080261 Gso6g0326 6 3009044 3014049 GST