Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0341 ATGGGTGCCAATCACAGTCGCGAAGATCTGTTGGAATCTTCCGATTCAGAGCAAGAGGAGCATGAAACCTTCGAAGACGCCACCGAAGGAAGCGCCGAACGGAAACCGTCAACGCCGTCATCCCTCGATGACGTGGAGGCCAAACTCAAAGCCCTGAAACTCAAATACTCCTCCAACTCCACCCCCGCCGTCAATAACGCCGTCAAGCTCTACGTCCACATCGGCGGCAACACCCCCAAAGCCAAATGGGTAACTTCCGAAAAACTCACCTCTTATTCATTCGTCAAAACCCACTCCGACACCGACACAGACGATGAAAACAACGACTCTGACAACGACAACGACGACTACGTCGAAACAAACGAAAAGCCTTTCTGGGTTTTAAAAGTCGGTTCGAAAATCCGATCAAAGGTGGGCCCGGAGATGGGACTGAAGAGCTTCCCCGAGCAGCGGCGCGTGGACTTCGTTGCGCGTGGCGTCTGGGCGATGAAGTTCTTCACCGACCAAGACCAGATCGACTTCATCGATTCCTTCCAGAAGTGTCTCTTCGAGAACACGCACGGCGTCGAGGCCACGGAGGCGAACAAGCTCAAAGTCTATGGCAAGGATTTCGTGGCGTGGGCGAAACCCGAAGCCGCCGATGATTCCATGTGGGAGGACGCAGAGGAAGTCTTCACCAAGAGCCCCACACCGGTTAGGTCAAACCAAGACCTAAAAGAGGAGTTCGAAGAAGCCTCCAACGGTGGAATTCAGAGCCTTGCGTTGGGGGCTTTGGACAACAGTTTCTTGGTGAGTGATAATGGGATTCAGGTTGTGAAGAATTTCGCACATGGGATTCACGGGAAGGGTGCTTTTGTGAATTTCAGTGATGGGTATCAAAATGGGGGTGGGGGTTCTACCTATTGTACCCCTAAGAAGACACTTCTGATGAGGGCTGAGACCAACATGCTTCTGATGAGCCCAATGGGTGGTGGGAAGCTTCACTCAACGGGTCTTCATCAGCTTGATATTGAGACAGGGAAGGTTGTGAGTGAGTGGATGTTTGGGAAGGATGGGACTGAAATTACGATGAGGGATATTACGAATGATAGCAAAGGGGCTCAGTTGGATCCTTCTGGGTCAACTTTTCTAGGGTTGGATGATAACAGGCTTTGTAGGTGGGATATGAGGGATCGTAATGGGATGGTTCAGAACTTGGCTGATTCAAATGCCCCTGTGTTGAATTGGGCACAAGGGCATCAGTTCTCGAGGGGGACTAACTTTCAGTGCTTTGCCACTACTGGTGATGGGTCCATTGTTGTGGGGTCTTTGGATGGGAAGATAAGGCTGTATTCGGTGAACACAATGAGGCAGGCGAAGACGGCATTTCCTGGCCTTGGATCGCCGGTTACTCATGTTGATGTAACCTTTGATGGAAAGTGGATTGTGGGTACTACTGATTCCTACTTGATTCTTATCTGTACCCTCTTTACTGACAAAAATGGAACGACGAAGACTGGGTTTGCTGGACGGATGGGGAATAGGATTGCTGCTCCCAGGTTGCTGAAGCTCAACCCTCTTGATTCACATTTGGCTGGAGCAAATAACAAGTTCCGCAATGCTCAGTTTTCGTGGGTGACAGAGAATGGGAAACAGGAGCGGCATATAGTAGCCACTGTGGGGAAGTTCAGTGTGATATGGAACTTCCAACAAGTCAAGGATGGTTCTCATGAGTGCTACCGTAACCAACAGGGTCTAAAGAGCTGCTTCTGCTACAAGATAGTCCTTAGGGATGATTCCATTGTTGAGAGCCGATTTATGCATGACAAGTTTGCAGTCACTGATTCTCCTGAGGCTCCATTGGTGATAGCCACCCCAATGAAAGTTAGCTCATTCAGCATATCTAGCAAGCGATGA 1896 0.4995 MGANHSREDLLESSDSEQEEHETFEDATEGSAERKPSTPSSLDDVEAKLKALKLKYSSNSTPAVNNAVKLYVHIGGNTPKAKWVTSEKLTSYSFVKTHSDTDTDDENNDSDNDNDDYVETNEKPFWVLKVGSKIRSKVGPEMGLKSFPEQRRVDFVARGVWAMKFFTDQDQIDFIDSFQKCLFENTHGVEATEANKLKVYGKDFVAWAKPEAADDSMWEDAEEVFTKSPTPVRSNQDLKEEFEEASNGGIQSLALGALDNSFLVSDNGIQVVKNFAHGIHGKGAFVNFSDGYQNGGGGSTYCTPKKTLLMRAETNMLLMSPMGGGKLHSTGLHQLDIETGKVVSEWMFGKDGTEITMRDITNDSKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNLADSNAPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSVNTMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDSYLILICTLFTDKNGTTKTGFAGRMGNRIAAPRLLKLNPLDSHLAGANNKFRNAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCFCYKIVLRDDSIVESRFMHDKFAVTDSPEAPLVIATPMKVSSFSISSKR* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0341 631 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 631 IPR040458 -
Gso4g0341 631 Pfam VID27 C-terminal WD40-like domain 254 574 IPR013863 -
Gso4g0341 631 Gene3D - 246 511 IPR015943 GO:0005515
Gso4g0341 631 MobiDBLite consensus disorder prediction 1 44 - -
Gso4g0341 631 SUPERFAMILY Putative isomerase YbhE 302 529 - -
Gso4g0341 631 MobiDBLite consensus disorder prediction 97 118 - -
Gso4g0341 631 PANTHER DEM PROTEIN 1 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0341 Gso-Chr4 3061381 3064520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0341 1 631 Acyl Lipid Metabolism Gene Families AT3G19240 63.456 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0341 - - gmx:100810233 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0341 4 3061381 3064520 Gso4g0341 4 3061381 3064520 ECH
Gso4g0341 4 3061381 3064520 Gso6g0323 6 2996993 3000123 GST