Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0340 ATGGAAGATGTTGAAGACAAGATACCCCCTGTCACCTCTTCAAAAATTACTGAAGAGACAACACTGGCAGAGCATGTTGGAGACAAGCTTCCATCTGAATCCTCTCCAAAAATTGCAGAAGAGACACCCCTGGCAGAACTTGTTGGAGACAGGCTTCCATCTGAAGCTTCTCCAAAAATTGCTGAAGAGACACCACTGGCAGAACATGTTGGAGACAAGCTACCATCTCAATTCTCTTCAGATATTGTTGAAGACACACCACTGGCAGAACATGCTGGAGACAAGCTACCATCTGAATTCTCTTCAGAAATTGTTGAAGAGACACCACTGGCAGAACATGTTGGAGACAACCAACCATCTGCATCCTCTTCAAAAATTGATGAAGAGACACCACCGGCAGAACATGTGACAGACAACTCTGAATCCTCTTCTAAAACTGCTGAAGAGTCACCACTGGCCGAACATGTTGTCGACAAGCTACCCTCTGAATCCACTACAAAAATTGCTGATGAGATGCCACTGGCAGACCCCCCTGAAGAAAATACTGAAGTGATAAACCCACCTGGCAATCAATCTTCCACTGAAGCTCCAACAATCCCACTTAGTAATGGAAAAATGGAGCCTGGTACTCATTTGCCAGTGGATGAGTTCTCTGAATTAGCAGTGTTGCCAAATGCTTCTGATGATCAAACTTTAATACAAGATGTTGCAGTTGATGTAACAGAAAAAAGCCAGCAGGTAACTTCAGCTGAAGATTCTGAACCAGGTGCTGTAGAAAATGTCTCTGACAGGCATGAATTGCAGGATGATATTTCTAATATCACTGCTGACAGTGATGCTGATAATGAGATTAGACTCTCAGCTTCTTCTTCTGAAACAAAAGATTCACAAAGTGATCACAATGAACTTACAATGGCTATGGGAACAGTTGGCTCACTCCCCCGTGCCAAGCTATTTGATGCAAAAAGAGGCCTTATTGATACCACAGCTCCTTTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGGATCCACACCGTGGAGAGACGCACTCTTGTAGAACAAGAACTTGAAAAGGCACAGGAGGAGATCCCAGAGTACAAAAAACAAGCAGAGACTGCTGAACAGGAAAAAGGTCAAGTACTAAAGGAGTTGGACAGCACAAAGAGACTAATAGAAGAATTAAAACTTAACCTAGAGAGAGCACATACAGAAGAGCGTCAAGCAAGACAGGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATTGCAGACGAATCAAGTGTTGCAGCCAAGGCACAACTTGAGGTAGCCAAAGCCAGATATACAGCAGCTGTTTCAGATTTAATAGCTGTGAAAGAGGAGCTGGAAGCATTGCACAAAGAATACACTTCCTTAGTGACTGATAGAGATGTAGCTATTAAGAAAGCTGAAGAGGCTGTTACTGCATCAAAGGAAGTAGAGAAGTCTGTTGAAGATTTAACTGTTGAACTAATTGCTGCAAAAGAGTCATTGGAGACTACACACGCTGCGCATTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCAATTGGGAGAAGGAACTTAAACAGGCAGAAGAAGAGCTCCAAAGACTCAACCAGCAAATTTCATCTGCGAAGGAACTCAAATCTAAACTGGAAACAGCCTCTGCTTTGCTGATTGATTTGAAAGCTGAATTAACTGCTTATATGGAATCAAAGTTAAAGCAAGAAGGAGGCCCAGAAGAACCAGAGATAAAGACACACACTGACATACGAGAAGCAGTGGCATCAGCCGGAAAGGAACTTGAGGAAGTAAATCTTAACATAGAGAAAGCAACTGCTGAGATTAGTATCTTGAAGGTAGCTGCTACATCATTGAAATTGGAACTTGAACAAGAAAAAGCAACTCTTGCCTCCATTAGGCAAAGAGAAGGAATGGCCTCCGTTGCAGTGGCATCTCTGGAAGCTGAATTGGAAAAGACCAGATCAGAAATAGCTTTGGTTCAGATGAAGGAGAAAGAAGCTAAAGAGAAAATGACCGAGCTTCCCAAGAAACTACAACTAACAGCTGAAGAGACTAATCAAGCCAACTTGCTTGCTCAAGCAGCTCGGGAAGAGCTACAGAAAGTAAAGGCGGAAGCAGAGCAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCTGAAAATTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAACTAGAAGCAAAAATGAAGTGGACCCATCTAATGGGGTAACACTGTCTTTGGAAGAGTACTATGAGCTTAGCAAGCGAGCACATGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCAGCTGCTAATTCTGAAATTGATAAAGTCAAGGAGTCTGAATTGAAAGCCTTTGAAAAGTTGGACGAAGTGAATAGAGAGATAGCTGCTAGAAGGGAATCCTTGAAATTGGCAATGGAGAAAGCTGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAATTAAGAAAGTGGAGAGCTGAAAGTGAACAACGAAGAAAGGCCGGCGAGTCTGGCCAAGGAGTAATAAACCAGAGTAAAAGCCCTAGGGGTAGTTTTGAGGGGAAAGCAAATAATTTTGACCGCACTAGTGATGCAGCTAATCCCGCACATTACTTGACAAGTCCAAAGGCTAATGAGCATGCAGACAATGATGAAGGTGGATCATCCCCAGAATCAAAACATGGAAAGAAGAAGAAGAAGTCAATTTTCCCAAGGGTTTTGATGTTCTTTGCAAGAAGAAAAACACATTCAACCAAGTCTGGGTAA 2922 0.4288 MEDVEDKIPPVTSSKITEETTLAEHVGDKLPSESSPKIAEETPLAELVGDRLPSEASPKIAEETPLAEHVGDKLPSQFSSDIVEDTPLAEHAGDKLPSEFSSEIVEETPLAEHVGDNQPSASSSKIDEETPPAEHVTDNSESSSKTAEESPLAEHVVDKLPSESTTKIADEMPLADPPEENTEVINPPGNQSSTEAPTIPLSNGKMEPGTHLPVDEFSELAVLPNASDDQTLIQDVAVDVTEKSQQVTSAEDSEPGAVENVSDRHELQDDISNITADSDADNEIRLSASSSETKDSQSDHNELTMAMGTVGSLPRAKLFDAKRGLIDTTAPFESVKEAVSKFGGIVDWKAHRIHTVERRTLVEQELEKAQEEIPEYKKQAETAEQEKGQVLKELDSTKRLIEELKLNLERAHTEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYTAAVSDLIAVKEELEALHKEYTSLVTDRDVAIKKAEEAVTASKEVEKSVEDLTVELIAAKESLETTHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRLNQQISSAKELKSKLETASALLIDLKAELTAYMESKLKQEGGPEEPEIKTHTDIREAVASAGKELEEVNLNIEKATAEISILKVAATSLKLELEQEKATLASIRQREGMASVAVASLEAELEKTRSEIALVQMKEKEAKEKMTELPKKLQLTAEETNQANLLAQAAREELQKVKAEAEQAKAGVSTLESRLLAAQKEIEAAKASENLAIAAIKALQESESTRSKNEVDPSNGVTLSLEEYYELSKRAHEAEERANMRVAAANSEIDKVKESELKAFEKLDEVNREIAARRESLKLAMEKAEKAKEGKLGVEQELRKWRAESEQRRKAGESGQGVINQSKSPRGSFEGKANNFDRTSDAANPAHYLTSPKANEHADNDEGGSSPESKHGKKKKKSIFPRVLMFFARRKTHSTKSG* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0340 973 Coils Coil 617 665 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 21 35 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 1 212 - -
Gso4g0340 973 Coils Coil 543 587 - -
Gso4g0340 973 Coils Coil 359 421 - -
Gso4g0340 973 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 298 968 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 242 302 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 889 921 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 929 944 - -
Gso4g0340 973 PANTHER WEB FAMILY PROTEIN-RELATED 298 968 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 858 886 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 151 165 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 257 272 - -
Gso4g0340 973 Coils Coil 838 879 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 87 101 - -
Gso4g0340 973 Coils Coil 715 763 - -
Gso4g0340 973 Coils Coil 810 830 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 858 973 - -
Gso4g0340 973 Coils Coil 673 700 - -
Gso4g0340 973 Pfam Weak chloroplast movement under blue light 323 883 IPR008545 -
Gso4g0340 973 MobiDBLite consensus disorder prediction 184 200 - -
Gso4g0340 973 MobiDBLite consensus disorder prediction 273 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0340 Gso-Chr4 3051457 3057790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0340 - - gmx:100812902 1771.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0340 4 3051457 3057790 Gso4g0340 4 3051457 3057790 ECH
Gso4g0340 4 3051457 3057790 Gso6g0321 6 2988870 2994271 GST
Gso14g0707 14 7173204 7179183 Gso4g0340 4 3051457 3057790 PCT
Gso4g0340 4 3051457 3057790 Gso14g0707 14 7173204 7179183 PCT