Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0317 ATGGCATACTTCGATTGCAATTTGCAACTTGGTTTCCTGTATAAATTTATGGCGAATGAACTACTAATCCTAAAGAAGCTAGCGGCACGTTCTATCCTAAAGAAGACACTAACAATGGGAATCTGCAGAAATATGGGTACCCAACCAAGGGTACAAAGAAGGCTAGGAGGAAACAGAGCTACACTTTTTGTATATGCTATGGAAGGGCTAGAGAACATGGCTTTTGTTGCCAATGCTGTGAGCCTAGTAACTTACTTCTTTGGGTACATGAACTTCAGCTTAACAAAATCTGCCACAACCCTGACCAACTTTATGGGAACTGCATTTTTACTGGCACTGGTTGGTGGATTAATCAGTGACACATATCTTTCTAGGTTCAAGACTTGTGTTCTGTTTGCCTGCATGGAATTGCTGGGATATGGTATCCTCACAGTTCAAGCACGCTTCCACCAATTAAGACCCATCCCCTGCAAAGATCTAGCAACAACCCAAATGAGTCAATGTGAGGCTGCTACAGGTGGCCATGCTGCAATACTTTATACTGGCCTCTACCTTGTTGCTTTAGGAACCGGTGGTATTAAGGCAGCTTTACCAGCCTTAGGGGCTGATCAATTTGATGAAAAAGATCCCAAGGAGGCAACTCAACTTTCAAGCTTTTTCAACTGGTTCTTGTTCAGCCTTACCATAGGAGCAATTATTGGTGTTACTTTCATTGTTTGGATTGGTGTCAACCTGGGATGGGATTGGAGCTTTATTGTATGCACATTAACAATTCTATTCGCAATTGTGTTCATATGCATGGGCAACTCGTTGTACCGAAACAATGTCCCAAAGGGAAGCCCTCTAGTTCGAATCATTCAGGTGTTTGTGGCAGCCTTTAGAAACAGAAAACTTCTGATTCCAGATAATACAGACGAGCTGCATGAGATTCATGAAAAGCAAGGAGGAGACTATTATGAAATTATTAAAAGCACGGATCAATTCAGATTCTTGGACCGGGCAGCAATTGCTAGAAGCAGCACAGGTGCAAGAACAACCTCAGGCCCCTGGAGACTTTGCACAGTGACACAAGTGGAAGAAACAAAAATCTTAGTCCGCATGCTACCAATAATACTCAGCACCATATTTATGAACACTTGTTTGGCTCAACTTCAGACTTTCACTATACAACAAAGCACCACCATGGACACCAACCTAGGGGGGTTTAAAGTGCCAGGACCCTCTGTACCAGTCATCCCTTTGCTGTTCATGTTTGTCCTAATCCCTTTATACGACCGTGTTTTCGTCCCGCTTGCTCGAAGAATCACAGGGATTCCCACCGGAATTCGACACCTTCAGAGGATTGGAATTGGTTTGGTTTTGTCTGCTGTTTCCATGGCAGTGGCTGGTTTTGTGGAAACACGCCGCAAGTCTGTGGCCATACAACACAACATGGTGGATAGCACTGAGCCTTTGCCAATAAGTGTGTTCTGGCTGGGTTTCCAATATGCTATTTTTGGAGCTGCAGACATGTTTACCCTGATAGGGCTTTTGGAGTTTTTCTATGCAGAAAGTTCAGCAGGAATGAAGTCACTTGGCACTGCAATCTCGTGGAGTTCCGTTGCATTCGGTTACTTTACAAGCACGGTGGTCGTTGAGGTGGTTAACAAAGTGAGTGGAGGCTGGCTGGCTAGTAACAACTTGAATAGAGACAACCTCAACTACTTCTACTGGTTATTGTCTGTGTTAAGCGTTGTAAACTTTGGATTCTATTTGGTTTGTGCTTCTTGGTATAGATACAAAACGGTGGAAAACGAGCAAGGTGATTCAAAAGATAATGTTGACATGGCCAAGGTTTAG 1839 0.4356 MAYFDCNLQLGFLYKFMANELLILKKLAARSILKKTLTMGICRNMGTQPRVQRRLGGNRATLFVYAMEGLENMAFVANAVSLVTYFFGYMNFSLTKSATTLTNFMGTAFLLALVGGLISDTYLSRFKTCVLFACMELLGYGILTVQARFHQLRPIPCKDLATTQMSQCEAATGGHAAILYTGLYLVALGTGGIKAALPALGADQFDEKDPKEATQLSSFFNWFLFSLTIGAIIGVTFIVWIGVNLGWDWSFIVCTLTILFAIVFICMGNSLYRNNVPKGSPLVRIIQVFVAAFRNRKLLIPDNTDELHEIHEKQGGDYYEIIKSTDQFRFLDRAAIARSSTGARTTSGPWRLCTVTQVEETKILVRMLPIILSTIFMNTCLAQLQTFTIQQSTTMDTNLGGFKVPGPSVPVIPLLFMFVLIPLYDRVFVPLARRITGIPTGIRHLQRIGIGLVLSAVSMAVAGFVETRRKSVAIQHNMVDSTEPLPISVFWLGFQYAIFGAADMFTLIGLLEFFYAESSAGMKSLGTAISWSSVAFGYFTSTVVVEVVNKVSGGWLASNNLNRDNLNYFYWLLSVLSVVNFGFYLVCASWYRYKTVENEQGDSKDNVDMAKV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0317 612 Gene3D MFS general substrate transporter like domains 34 600 IPR036259 -
Gso4g0317 612 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 50 600 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso4g0317 612 SUPERFAMILY MFS general substrate transporter 47 145 IPR036259 -
Gso4g0317 612 Pfam POT family 126 552 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso4g0317 612 PANTHER PEPTIDE/NITRATE TRANSPORTER 50 600 - -
Gso4g0317 612 SUPERFAMILY MFS general substrate transporter 174 600 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0317 Gso-Chr4 2841390 2845539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0317 51 595 Organic Solute Cotransporters AT1G69850 44.561 1.41e-157 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0317 K14638 - gmx:100805429 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0317 4 2841390 2845539 Gso4g0317 4 2841390 2845539 ECH
Gso4g0317 4 2841390 2845539 Gso6g0299 6 2774501 2778475 GST